Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1400 ATGGAGAGTACTGAGTCATCGATCGATTCACAACAACCGAACCTGCCACCTGGGTTCCGGTTCCACCCAACAGATGAGGAACTCGTTGTTCACTACCTCAAGAAAAAGGTTTCCTCTGATCCTCTCCCTGCATCTATAATCGCCGATGTTGATCTCTATAAATTCGATCCATGGGAACTACCAGCTAAGGCATCGTTTGGGGAGCAAGAGTGGTACTTTTTTAGCCCAAGGGACAGGAAGTACCCGAATGGAGCAAGGCCAAACAGAGCTGCAACTTCTGGATATTGGAAGGCAACAGGAACAGATAAACCAGTGTTGTCATCTAGTGGGGCCCAGAAGGTTGGGGTGAAGAAAGCTTTGGTATTCTATGGTGGGAAGCCACCAAGAGGGATAAAGACCAATTGGATCATGCATGAATACCGAATTGCTGATAACAAGCCTACCAATAATAAGCCTCCTGGATGTGACTTGGGAAACAAGAAAAATTCCCTAAGGTTGGATGATTGGGTATTGTGCAGAATCTACCAGAAAAGCAATACACAAAGGTCACCTATGGAGCATGAGAGGGATGATTCCATGGATGACATGATTGGAGGGTTACCTTCATCCAACGTGGGCCATATGAATATGGGGTTTCACTTGTCAAAGATGTCCACAACCTACACTAGTAATAATACTAATGGTGCATTGTTGGAAAATGACCAAAACTTCTTAGAAGGGTTGATGTTAGGCAATGGTGGGATGAACACAACAAATGCCATATCTTCTCATTTGGAAACCTCAAACACTGCCTCCAAAAGAACACTCTCATCACTATATTGGAATAATGGTCATAATGAAGATGTGGATGGTACCTCATTGTGTAACAAAAGGTTCAATTTTATGGACAGTGCTGCTGGGGATTGCAATGTTGTGAGGTCTGAAGAAAATGGCACTGCTACTGTTAACTCCATTGCAACCTTGCTTAACCATCTTCCACAACAAACACCTAATTCAATGCAACAACAGCAACAGCAACAGCAACAAACAATGCTGGGTTCCATAGGAGATGGATTATTTCGGACACCATATCAAATACAAGGGATGAATTGGTATGGTTAG 1101 0.4332 MESTESSIDSQQPNLPPGFRFHPTDEELVVHYLKKKVSSDPLPASIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSSSGAQKVGVKKALVFYGGKPPRGIKTNWIMHEYRIADNKPTNNKPPGCDLGNKKNSLRLDDWVLCRIYQKSNTQRSPMEHERDDSMDDMIGGLPSSNVGHMNMGFHLSKMSTTYTSNNTNGALLENDQNFLEGLMLGNGGMNTTNAISSHLETSNTASKRTLSSLYWNNGHNEDVDGTSLCNKRFNFMDSAAGDCNVVRSEENGTATVNSIATLLNHLPQQTPNSMQQQQQQQQQTMLGSIGDGLFRTPYQIQGMNWYG* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1400 366 PANTHER NAC TRANSCRIPTION FACTOR 56 1 333 - -
Lan8g1400 366 SUPERFAMILY NAC domain 9 177 IPR036093 GO:0003677|GO:0006355
Lan8g1400 366 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Lan8g1400 366 MobiDBLite consensus disorder prediction 1 20 - -
Lan8g1400 366 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 333 - -
Lan8g1400 366 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lan8g1400 366 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1400 Lan-Chr8 20863690 20866606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1400 1 365 NAC Transcription Factor Family AT3G15510 50.895 8.22e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1400 NAM 3.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1400 - - gmx:100784578 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1400 8 20863690 20866606 Lan8g1400 8 20863690 20866606 ECH