Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1399 ATGGGAGTTCCAGAGAAAGATCTACTTGCACAATTGAGTTTACCTCCTGGTTTTCGATTTTTCCCAACAGATGAAGAGCTTCTTGTTCAATACCTATGCCGCAAGGTAGCTGGCTATCATTTTTCTCTTCCAATCATTGCTGAAATAGACTTGTACAAGTTCGACCCATGGGTTCTACCAGGTAAAGCAATATTTGGTGAGAAAGAGTGGTACTTTTTTAGCCCTAGAGATAGGAAGTATCCGAATGGTTCACGACCCAATAGAGTTGCTGGTTCTGGGTATTGGAAAGCAACTGGAACAGACAAAATCATCACCACTGAAGGTAGACAAGTTGGAATAAAAAAAGCACTTGTTTTCTACATTGGTAAAGCACCCAAAGGCACCAAAACTAACTGGATTATGCACGAATATCGCCTTCTTGATTCTTCTCGAAAGAACAACGGTAGCGCTAAGCTAGATGATTGGGTTCTGTGTCGGATTTACAAGAAGAATTCAAGTGCGCAAAAGACTGTGATACCAAGCTTTTCGAGCAAAGAATACAGCAATGGAGGATCGTCTCCTTCTACATCGTCTCATGTAGAAGACATGATTGAATTACCTGAAATAAATGAACAGTTCTTCACGCTTCCACGCATGAACTCGCTGAGAACTTCACAGCAGAACCAGGAGGGTTTTCAGAACCTAGAGAATTTCTCTGATTGGGTTAACTCGTCCGGTTTAGACTCGGTGCCCGAGTTTCAAACTCAGGGGATGGTGAATTACGGTTGTAATGACCTCTTTGTCCCTTCTATGCCGCAATTCTGCCACGTGGACTTGACGGCGGAGGAAGAGGTTCAGAGTGGCATAAGAAACCAACGAAAGGTTAACGATAATTCTGGGTTTTATCAGCAGAATCAGAATGTGTTCTTACAATACAATGACCCGTTTAGTTTTGGATACCCAAATCAACAAGACGGGTTTAGTTTTACCAAATAA 975 0.4215 MGVPEKDLLAQLSLPPGFRFFPTDEELLVQYLCRKVAGYHFSLPIIAEIDLYKFDPWVLPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRQVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNNGSAKLDDWVLCRIYKKNSSAQKTVIPSFSSKEYSNGGSSPSTSSHVEDMIELPEINEQFFTLPRMNSLRTSQQNQEGFQNLENFSDWVNSSGLDSVPEFQTQGMVNYGCNDLFVPSMPQFCHVDLTAEEEVQSGIRNQRKVNDNSGFYQQNQNVFLQYNDPFSFGYPNQQDGFSFTK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1399 324 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Lan8g1399 324 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Lan8g1399 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 297 - -
Lan8g1399 324 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lan8g1399 324 PANTHER NAC TRANSCRIPTION FACTOR 56 1 297 - -
Lan8g1399 324 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1399 Lan-Chr8 20847143 20848537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1399 1 321 NAC Transcription Factor Family AT4G27410 57.895 5.24e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1399 NAM 5.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1399 - - adu:107478293 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1399 8 20847143 20848537 Lan8g1399 8 20847143 20848537 ECH