Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1398 ATGGAGCTTGAGATTGCAGATATTGAGTCTCAAACTACTTACAAAGCAACAATTCAAGAAGAATCACGTGACATCTTTCACAAGGGAAATCGTTCTATAATTCTCAAGTTCCACAATGTTGTATACAAAATTCAGACAAAAAAAGTGGGATTATTTGAGAAGAACAAAAAAGCAGAAGAGAAAGTGATCCTAAATGGAGTAACAGGCATGGTTGAACCTGGTGAAATTCTAGCCATGCTTGGTCCATCTGGAAGTGGCAAAACAACTCTTCTAACAGCCTTAGGAGGCAAGCTTGGAGGGCAGCTTCAAGGAACCATAACTTACAATGGCAAACCTTTCTCAAATTCAATGAAGAGAAAAACTGGTTTTGTTACACAAGATGATGTTCTCTATCCCCACTTAACTGTCACTGAAACTCTAGTCTTCACAGCTCTTCTAAGGTTGCCTAATAGTTTCACCAAAGAAGATAAAATCATGCATGCAAATGCTGTCATGACTCAACTTGGTTTAACTAGGTGCAAGAATAGCATCATTGGAGGCCCATTGCTTAGAGGGATTTCAGGGGGAGAAAGAAAAAGGGTTAGCATTGGACAAGAAATGCTCATAAATCCAAGCTTGTTGTTTCTTGATGAACCTACCTCTGGCCTTGACTCAACAACAGCTCAAAGGATTCTATCAACTTTGTGGGAGCTAGCAAGTGGAGGGAAAACTATTGTGATGACAATACACCAACCTTCAAGTAGGATATACTACATGTTTCACAAGGTGTTGCTGCTATCAGAAGGGAATGTATTGTATTATGGAAAGGGGTCTGAAGCTATAGAATATTTCTCTAATATTGGATATGCCCCTACAATGGCCATGAACCCTGCAGATTTCCTTTTGGATCTTGCAAACGGTGTCTACACAGATCAACCGAATGAGGACCATGCCTTAAACAAACACAAATTGATTTCTGCATATAAGAACTACTTCAATACCAATTTGAAGCCCAGTCTTCATGAGATTCCTGATTATGGTAAAAGTCAAGGTAGATTTGAAGACAATGGGGTTGAGAAATGGCCTACCACTTGGTGGCAACAATTCTCTGTGCTGCTAAGAAGATATGTAAAAGAGAGAAAACATGAATCATTTTCTGGCTTAAGGGTTTGTCAGATCCTCCTGGTTTCCTTTATTGCAGGACTACTCTGGTATAAGTCTGATATTTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTTGTTGCAAGTTTCTGGGCTGTTTTCCCTCTCTACCAAGCAATCTACACCTTCCCAAAAGAGATATTGATGCTGAAGAAAGAACGTTCCTCTGGAATGTATAGGCTCTCTTCATACTTCTTTTCAAGAATGGTGGCTGATCTTCCAATGGAACTTATTCTACCCATCATTTTTCTTTTCATAATATATTGGATGGCAGGGCTAAAAGCTAATGTGGTTAACTTCATATACACATTGTTCAGTCTCATACTCAATGTGTTAGTCTCACAAGGGATAGGCCTTGCTATTGGTGCTATCGTATTGGATCAAAAATCAGCAACCACACTTGCCTCAGTAATAATGCTAAGTTTTTTGCTGGTTGGTGGATTCTATGTTCAACATGTGCCAAAATTTATATCATGGATAAAGTACATCTCCACTAGTTACTATGTATACCATCTACTGATGGGGTCTCAGTATGACACTAGTGACACATACCCATGTTCTAAGGGACAGTGTTTTGTTGCAGAATTTCCAATGATAAAGCAAATTGGTCTTGATTTAAGAGGCCAAATGATAGCTGCATCTGCTCTAGGGTTAATGCTAATAGGGTACAGACTTGTGGCTTATTTTGCTCTTATGAGGATTGGGGTGACAAAGAAATTGGGCTAG 1890 0.3931 MELEIADIESQTTYKATIQEESRDIFHKGNRSIILKFHNVVYKIQTKKVGLFEKNKKAEEKVILNGVTGMVEPGEILAMLGPSGSGKTTLLTALGGKLGGQLQGTITYNGKPFSNSMKRKTGFVTQDDVLYPHLTVTETLVFTALLRLPNSFTKEDKIMHANAVMTQLGLTRCKNSIIGGPLLRGISGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRILSTLWELASGGKTIVMTIHQPSSRIYYMFHKVLLLSEGNVLYYGKGSEAIEYFSNIGYAPTMAMNPADFLLDLANGVYTDQPNEDHALNKHKLISAYKNYFNTNLKPSLHEIPDYGKSQGRFEDNGVEKWPTTWWQQFSVLLRRYVKERKHESFSGLRVCQILLVSFIAGLLWYKSDISHLQDQIGLLFFVASFWAVFPLYQAIYTFPKEILMLKKERSSGMYRLSSYFFSRMVADLPMELILPIIFLFIIYWMAGLKANVVNFIYTLFSLILNVLVSQGIGLAIGAIVLDQKSATTLASVIMLSFLLVGGFYVQHVPKFISWIKYISTSYYVYHLLMGSQYDTSDTYPCSKGQCFVAEFPMIKQIGLDLRGQMIAASALGLMLIGYRLVAYFALMRIGVTKKLG* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1398 629 CDD ABCG_EPDR 32 268 - -
Lan8g1398 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 623 - -
Lan8g1398 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 14 623 - -
Lan8g1398 629 Pfam ABC-2 type transporter 243 311 IPR043926 GO:0140359
Lan8g1398 629 Gene3D - 48 280 IPR027417 -
Lan8g1398 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 280 IPR027417 -
Lan8g1398 629 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Lan8g1398 629 Pfam ABC-2 type transporter 360 566 IPR013525 GO:0016020|GO:0140359
Lan8g1398 629 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Lan8g1398 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 286 IPR003439 GO:0005524
Lan8g1398 629 SMART AAA_5 73 263 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1398 Lan-Chr8 20838067 20842623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1398 63 300 Calmodulin-binding Proteins AT2G36910 26.639 3.77e-12 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1398 8 20838067 20842623 Lan8g1398 8 20838067 20842623 ECH