Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1383 ATGGAGGCTAGGAACAATGAGAGGAAGAGAACAGTGACTGAGAATGCAAGAAAGGGTAGCAGAGTTGAAGTAGAAGAGGAGTATGAAAGTGTTAGTGTTGAACATCTTACAGAAGAAGAGAAGAAGAAAGGGGTTGGTGGGAGAAAAGGTTCATCAAGTGGAGGAGTTTCTCCACCTTCCTGCCAGGCAGAGAAGTGTGGAGCTGATATGACTGATGCAAAGAAATATCATCGCCGCCATAAGGTGTGTGAGTTTCATTCCAAGGCACCTGTTGTGGTGGTTGCAGGCCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCTGAGTTTGATGAAGCTAAGAGAAGCTGTCGTAGACGCTTGGCCGGACATAACGAACGGCGTCGTAAAAGCAACCCTGAAACATGCAATGAGGGCTGCAGGCACAGCAAAGGCAATCATCCTAAGGAAAGTCAGTGCAGGCATGCTGATGAGAGGGGTCTAATTCAGATGAATATGGTGGCAGGGACTTCTGGTTACAAACCATTTCATATCAGATAA 552 0.4728 MEARNNERKRTVTENARKGSRVEVEEEYESVSVEHLTEEEKKKGVGGRKGSSSGGVSPPSCQAEKCGADMTDAKKYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKSNPETCNEGCRHSKGNHPKESQCRHADERGLIQMNMVAGTSGYKPFHIR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1383 183 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 145 - -
Lan8g1383 183 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 145 IPR044817 GO:0003677
Lan8g1383 183 MobiDBLite consensus disorder prediction 126 159 - -
Lan8g1383 183 MobiDBLite consensus disorder prediction 1 47 - -
Lan8g1383 183 SUPERFAMILY SBT domain 59 139 IPR036893 GO:0003677|GO:0005634
Lan8g1383 183 MobiDBLite consensus disorder prediction 1 64 - -
Lan8g1383 183 MobiDBLite consensus disorder prediction 131 159 - -
Lan8g1383 183 ProSiteProfiles Zinc finger SBP-type profile. 58 135 IPR004333 GO:0003677
Lan8g1383 183 Pfam SBP domain 61 134 IPR004333 GO:0003677
Lan8g1383 183 Gene3D - 51 122 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1383 Lan-Chr8 20722130 20723371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1383 39 138 SBP-box Gene Family AT2G33810 68.000 1.95e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan8g1383 SBP 6.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1383 - - aprc:113864686 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1383 8 20722130 20723371 Lan8g1383 8 20722130 20723371 ECH