Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1382 ATGGTGGGCTCAGGAGGAGATAGGAGAACAGAAGCAGTTGGCATGATGGCCCTTCATGACGCCCTCAGAACTGTCTGTCTTAACTCTGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGGGTCAGAGGTGGCAATGGCTGCAAGGTTGGTGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGTGTTTCAGATTGTCTAGTAGATATTAATGGAGAGGATCCTGTCAGAAAGTCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAAGTTGCATCTGATAAGTGCCATAAGTGGGTCTTCAAAGAGCCCACCGAATCTGAGCCAAATATCTCCAACTACTGGCAGAGCTCATTTGATGCTATTCCAACTGAATGGACCGATCAGTTTGAGTCTGGCATCCAGACAATCGCTGTAATTCAAGCTGGCCATGGCCTTTTGCAACTTGGTTCTTGCAAGATTATACCTGAAGATCTCCACTTTGTGTTAAGAATGAGACACACTTTTGAATCTCTAGGGTACCAATCTGGGTTCTACATCTCCCAACTATTCTCTTCAACTAGGAACACTTCCTCTTCTACTCCACTTCCTTCAAAACCAATATCCACCACCACCCCAATTAGGCCACCTCCTTCACTCTTCAACTGGGGTCAAAGACCACTTGGTTCTGCTCCTCCTTCTATGCTATCCTCACCAAATTTTCAACATGGGTTCCCACAGCAACATGCCAGAGATGATGAGACACATATGTTCCTTATGCCTCATGCATCATCCGAAACATCAAGAATGGAAGAGATTATGGGAGGAGGAGGAGGAGGAGAACGTGATCAGAATGATATAAAATGGCCAAATGGGTTATCTTTCTTCAATGCACTCACTGCAAGAACCGATGATGCTAAGATTTTGTTTAACTCTGAGAGCTTGGGAAACAAAGGAGGTGATCACAGTCACCATCACTCTCTTAATGCAAATCCTACTTCAGATGATTCTAACATGCAAAATGGTAGTAGTTCCAATCTTAATGAGTTTTTGAGCTTGGATAGTCATCATGAAAGTGCAAGGAAAATGGAGAAGTTTAAGAGGAGTTTCCCTCTATCATCAGCATCTACTTCAATGGATCATCATCAACAAGCACCTGTGGAGTATAGGAATTCAGAAGGGGGCATGTACTCTGATGTTATGGACACCATTTTAGAGTGA 1251 0.438 MVGSGGDRRTEAVGMMALHDALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGSVSDCLVDINGEDPVRKSFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTESEPNISNYWQSSFDAIPTEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYISQLFSSTRNTSSSTPLPSKPISTTTPIRPPPSLFNWGQRPLGSAPPSMLSSPNFQHGFPQQHARDDETHMFLMPHASSETSRMEEIMGGGGGGERDQNDIKWPNGLSFFNALTARTDDAKILFNSESLGNKGGDHSHHHSLNANPTSDDSNMQNGSSSNLNEFLSLDSHHESARKMEKFKRSFPLSSASTSMDHHQQAPVEYRNSEGGMYSDVMDTILE* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1382 416 PANTHER GB|AAF34833.1 1 416 IPR044170 -
Lan8g1382 416 MobiDBLite consensus disorder prediction 364 378 - -
Lan8g1382 416 MobiDBLite consensus disorder prediction 276 296 - -
Lan8g1382 416 MobiDBLite consensus disorder prediction 204 218 - -
Lan8g1382 416 MobiDBLite consensus disorder prediction 340 363 - -
Lan8g1382 416 MobiDBLite consensus disorder prediction 327 394 - -
Lan8g1382 416 MobiDBLite consensus disorder prediction 204 226 - -
Lan8g1382 416 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 186 IPR025610 -
Lan8g1382 416 MobiDBLite consensus disorder prediction 380 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1382 Lan-Chr8 20706373 20708940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1382 19 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.583 1.13e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1382 - - gmx:100814723 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1382 8 20706373 20708940 Lan8g1382 8 20706373 20708940 ECH