Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1381 ATGTCAATCTTAGTCACTAGAAGAACCATTTACCAAGTCGTTAGAATTCGAGCTTTGAATCCTAGAGGACGATGGACAATTATAAATGGTGTTTATGTCTTTGATTCCCTTTACATTAATCATGGCTACAACTATGGTCGTGTCTCAAGGATGAACACTACCCCATACATGTATCATAGCAACAACAACGATGATGGGGACTCATGGATGAACACTACTCCATACATGGATCATGACAACAACAATAATAACAGTAACAATGGTCGGGTCTCAAGGGTGACCCCTGCTCCTGAAGATTCCATTGAAAATCTTGAAAGGTTCACAATTGAAGGAGGAACAGACTCATCATCTTCTTCTTCTATGCCTTCATGTTCAATATGTCTTGATGAACTTTCAGTTGGATCAGAAGCAACTCGCATGCCTTGCTCTCATGTCTATCATAACCATTGCATTGTTAAGTGGCTTAATACATGTAACATGTGCCCTTTGTGTCGAAGTACAATATAG 507 0.3945 MSILVTRRTIYQVVRIRALNPRGRWTIINGVYVFDSLYINHGYNYGRVSRMNTTPYMYHSNNNDDGDSWMNTTPYMDHDNNNNNSNNGRVSRVTPAPEDSIENLERFTIEGGTDSSSSSSMPSCSICLDELSVGSEATRMPCSHVYHNHCIVKWLNTCNMCPLCRSTI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1381 168 SMART ring_2 124 164 IPR001841 -
Lan8g1381 168 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 75 166 - -
Lan8g1381 168 ProSiteProfiles Zinc finger RING-type profile. 124 165 IPR001841 -
Lan8g1381 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 168 IPR013083 -
Lan8g1381 168 PANTHER F6A14.12 PROTEIN-RELATED 75 166 - -
Lan8g1381 168 Pfam Ring finger domain 123 165 IPR001841 -
Lan8g1381 168 SUPERFAMILY RING/U-box 123 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1381 Lan-Chr8 20698106 20698612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1381 85 165 C3H Transcription Factor Family AT1G14200 40.741 3.07e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1381 - K11982 qsu:111998776 89.7373