Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1374 ATGGGTAGCTACTACCACCGCCACTTTGATAGCAATGATGCACTTCTCCCACCGGGTTTTCGATTCCACCCCACTGATGAGGAGCTTATCACATACTATCTCCTCAAGAAGGTTCTTGACAACACCTTCACTGGTAGAGCTATAACTGAAGTTGACCTTAACAAGTGTGAGCCATGGCAGCTTCCTGGGAAAGCAAAGATGGGTGAGAAGGAGTGGTACTTCTTTAGCTTACGTGATAGGAAGTACCCAACTGGGTTACGTACTAATAGAGCCACAGAAGCTGGTTATTGGAAAGCTACTGGGAAGGATAGAGAGATTTATAGCTCCAAGACTTGTGCTCTTGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAGAGCAATTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTATCATTATCTCTCTAGAAGCTCCAAGGATGAATGGGTCATATCCCGTGTGTTCGAAAAGAATACCATAGGTGGTGGTTCCACCGTGTCCACCACCACCAGTGGTTCAAAGAAGACAAGGGTTAGCACCTCATCTGCAAGCATGAGCCTCTATCCTGAACCCGGTTCACCCTCTTCCATTAATCTTCCACCACTGCTGGACTTTTCTCCTTACACCACTCAAACCAGCAGCGCCGCCGCCTTCAACGACCATGATAACTGCTCCTACGACAGCACCATCGCTTCCCAAATAGAGCACGTGTCCTGTTTCTCCACGACCTCTGCCAACAACTTCAACAATGCCACCTTCGACCTTGTACCGCCGTCGCAGACACCTCTGAATCTGGACCCTTTCACTCGGTTCCAGAGGAACGTTGGCGTCTCTGCCTTCCCGAGCCTGAGGTCTCTGCAAGATAACCTTCAACTCCCGTTCTTTTTCTACTCAGCGTCTCAGCCAGTTCACGATGGTGGTGCCAATGACATGGCCGCCATCGGGAACTGGCCGATGCCGGAGGAGGAGAAGGTGGTGCCTGATGGTGGTTCCAGCACGGGGTTTGGACATTCCGAGCTTGATTGCATGTGGGGATATTGA 1074 0.4963 MGSYYHRHFDSNDALLPPGFRFHPTDEELITYYLLKKVLDNTFTGRAITEVDLNKCEPWQLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFEKNTIGGGSTVSTTTSGSKKTRVSTSSASMSLYPEPGSPSSINLPPLLDFSPYTTQTSSAAAFNDHDNCSYDSTIASQIEHVSCFSTTSANNFNNATFDLVPPSQTPLNLDPFTRFQRNVGVSAFPSLRSLQDNLQLPFFFYSASQPVHDGGANDMAAIGNWPMPEEEKVVPDGGSSTGFGHSELDCMWGY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1374 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 354 - -
Lan8g1374 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 7 354 - -
Lan8g1374 357 SUPERFAMILY NAC domain 11 168 IPR036093 GO:0003677|GO:0006355
Lan8g1374 357 MobiDBLite consensus disorder prediction 173 204 - -
Lan8g1374 357 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan8g1374 357 Gene3D NAC domain 25 171 IPR036093 GO:0003677|GO:0006355
Lan8g1374 357 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1374 Lan-Chr8 20643498 20645974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1374 4 357 NAC Transcription Factor Family AT5G53950 56.266 3.06e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1374 NAM 5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1374 - - gmx:100788671 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1374 8 20643498 20645974 Lan8g1374 8 20643498 20645974 ECH