Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1301 ATGGCATTGCTTCCTAGACTATTAGTTCTCCCCTTAATGTTATTTATTAGCTGCTCTTTCAAGCTCACAGGAGCCACAGATTGTGGTGGGAAGAGAATTAGAACTCATCTCACTGTTGGTAAAGGTAAAAATGTAGCATTCAATACTATTCAAGCTGCAATTGATTCTATAAGGCAGAACAATAACAAGTGGGTTCAGATTAACATACATGCTGGCACGTACAAGGAGATGATTAATATATCTTTAGATAAGCCATGCATAATCTTAAAAGGAGCCGGTAGCAAGAACACGATCATCCAATACAATCCCCACCAAGTAAATGGTGATTGGAATCCAACGTTTTCTTCTTCTCCACCCAATGTGGTTGTGCTTGGCATTACCATCAAGAACACATTTGGTGTTGGGTCACAAGCAGTAGCAGCAGCCATATTTGGAGATAAATCGGTCTTTTATAACTGTAGATTCTATGGCTTTCAAGACACTTTGCTTGATTCAAATGGACGCCATTATTTTAAAAATTGCTACATTGAAGGTGAAGTTGATTTCATTTTTGGTAGTGGCCAATCCTATTATGAGGATTGTGTGATTAATGCTACAGGACCAATATCTCCACCAGCTTTTATAACTGCCCAATATCGTGATTCAGAAAATGACACGAGTGGTTTTATATTTAGACGAGGTTCTGTTATTGGAAACAGTGGCAATGTAAAATTAGGAAGAGCTTATGGTCCATACTCTAGAGTTATATTTTATGAAACACATTTTTCATCAGCGGTAACCTCTGAAAGATGGAATGCTTGGAATTTTAAAGGCAATGAATCTCAGTTCACATATGCAGCAGTTAAATGTACAGGGCCAGGGACTCTTACATCACAAAAAGACCCATTGGAGAAAAACCTTGATGCTTCACAGTTAGAACAATTTTCTTTATCATCTTTCATTGATAATGATGGTTGGTTGTCCAAATTACCCATTAGTATTTTGTAA 987 0.3728 MALLPRLLVLPLMLFISCSFKLTGATDCGGKRIRTHLTVGKGKNVAFNTIQAAIDSIRQNNNKWVQINIHAGTYKEMINISLDKPCIILKGAGSKNTIIQYNPHQVNGDWNPTFSSSPPNVVVLGITIKNTFGVGSQAVAAAIFGDKSVFYNCRFYGFQDTLLDSNGRHYFKNCYIEGEVDFIFGSGQSYYEDCVINATGPISPPAFITAQYRDSENDTSGFIFRRGSVIGNSGNVKLGRAYGPYSRVIFYETHFSSAVTSERWNAWNFKGNESQFTYAAVKCTGPGTLTSQKDPLEKNLDASQLEQFSLSSFIDNDGWLSKLPISIL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1301 328 Pfam Pectinesterase 37 316 IPR000070 GO:0030599|GO:0042545
Lan8g1301 328 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lan8g1301 328 SUPERFAMILY Pectin lyase-like 34 324 IPR011050 -
Lan8g1301 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 326 - -
Lan8g1301 328 Gene3D - 30 327 IPR012334 -
Lan8g1301 328 PANTHER PECTINESTERASE 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1301 Lan-Chr8 19607093 19610014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1301 47 273 Carbohydrate Esterase AT2G19150 44.726 1.67e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1301 - - gmx:100803932 352.058