Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1296 ATGGCTTCAGAGAAGAAACTATCGAACCCGATGAGGGAAATCAAGGTTCAGAAGCTTGTCCTCAATATCTCTGTTGGTGAGAGTGGAGATCGTCTCACCAGAGCTGCAAAGGTGTTGGAACAGCTTAGTGGCCAAACCCCTGTTTTTTCTAAAGCAAGGTACACTGTTCGTTCTTTTGGTATTCGAAGAAATGAAAAAATTGCATGTTATGTTACTGTTAGAGGTGACAAGGCAACACAGCTTTTGGAGAGTGGTTTGAAGGTGAAGGAATACGAACTTCTCCGAAGAAACTTCAGTGATACTGGATGTTTTGGCTTTGGTATTCAGGAGCATATCGACTTGGGAATCAAGTATGATCCTTCAACCGGTATTTATGGAATGGACTTCTATGTTGTTTTGGAACGCCCTGGTTACCGTGTTGGACGTCGTCGTCGCTGCAAGGCTCGTGTTGGTATCCAGCATCGTGTTACAAAGGAAGATGCTATGAAGTGGTTCCAAGTGAAATATGAAGGTGTGATCCTGAACAAGTCGCAGAATATCTCTTAG 546 0.4359 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKATQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS* 182
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1296 181 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lan8g1296 181 Pfam Ribosomal protein L5 9 62 IPR031310 -
Lan8g1296 181 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lan8g1296 181 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
Lan8g1296 181 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Lan8g1296 181 Gene3D - 2 177 IPR022803 -
Lan8g1296 181 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lan8g1296 181 SUPERFAMILY RL5-like 8 173 IPR022803 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan8g1296 Lan-Chr8 19454823 19457670 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1296 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 96.133 1.47e-130 362
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1296 K02868 - thj:104806164 337.806