Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1292 ATGGAGAATAGAAACTCAGTTGAGAATTCTTCTAATATTGAATCTACAACGAACAATTCAGCATCACGTAGGAGTATTATGTCTAACCACTCTAGAGGTTCTGGCAGGAATTCAATAAGGGAAGTGACTTTTGACCAGTCAGGATCCAAGCCTGTGAGGTATGGATCAAAGGGTGGTGCTGATTCTGAATTTCTAAGTATGTCTCAGAAGGAATTCAGTGATGAGGATGCTAGGTTGATTTACATTGATGATCCTGAGAGGACTAATGAGAAGTTTGGGTTTGCAGGGAATTCGGTCCGGACCGGGAAGTACTCTATCCTTAGCTTTGTGCCTAGGAATTTGTTTGAACAATTTCATAGAGTTGCATACATTTATTTCCTTATAATTGCTGTACTTAATCAGCTACCTCAACTTGCTGTATTTGGAAGGGGTGCTTCCATTTTGCCATTGGCTTTTGTATTGCTTGTTACTGCAGTGAAAGATGCATTTGAAGATTGGAGGAGGCATAGATCAGACAAAGTTGAGAATAACAGGTTAGCATCTGTTTTGGTTAATGGTCAATTTCAAGGGAAGAAATGGAAGGATGTTAGGGTTGGTGAGGTTATTAAAGTTATTGCTAATGAAACCATGCCTTGTGATATTGTGTTGCTGTCAACTAGTGACCCTACTGGGGTTGCATATGTGCAAACAATTAATCTAGATGGCGAGTCTAATTTGAAAACTCGGTATGCGAAACAAGAGACTCATTCTAAGTTGCCTGAAAATGGGAAGTATAATGGGTTCATTAAGTGTGAGAAACCTAATAGGAACATCTATGGATTTCAGGCTAATATGGAAATTGATGGAAAGAGGTTGTCTCTTGGATCCTCGAATATTGTCCTTAGAGGCTGTGAGCTTAAGAATACTAGTTGGGCACTTGGTGTCGCTGTATACTGTGGCCGTGAGACCAAAGCTATGCTCAATAGCTCAGGAGCTCCATCCAAGAGGAGCCGGTTGGAGACTCGTATGAACTTTGAGATCATAATTCTCTCTTTCTTTCTTGTAGCTTTGTGTACTGTCGCCTCAATTTGTGCTGCTGTTTGGTTAAAGCGCAACAAGAACAAGCTAAATCTCTTGCCTTATTATAGGAAATTGGATGTTTCGAAGGGGAAAGAGGAACACTATGAGTATTATGGTTGGGGAATGGAAATCCTTTTTACATTCCTCATGGCAGTTATAGTGTACCAGGTCATGATTCCCATATCTCTGTACATTTCAATGGAGCTTGTTCGTGTTGGTCAGGCATACTTCATGATTGGGGACTCCAGAATGTATGACGAGGCAACAGATTCAAGATTTCAATGCAGGGCTTTAAATATTAATGAAGATTTGGGGCAAATTAAATATGTCTTCTCTGACAAAACCGGTACACTTACTGAGAACAAGATGGAGTTTCAATGTGCAAGCATCCGGGGAGTTGATTACAATTTTCCAAAAGTCAGTGTGGAGAACGAGCAAGTTGAATACTTTGTTCAAGTGGATGGAAAGGTTTTGAAGCCAAAGATGAAGGTGAAAGTTAATCCAGAACTTTTGCAGTTATCAAAAAGTGGGTTTGGAAGTAAAGAAGGGAAATGGATTTATGATTTCCTTCTAGCACTGGCAGCCTGCAATACTATTGTGCCTCTTGAAGTTGACACATCTGACCCAACCGTCAAGCTGATAGATTACCAAGGGGAATCACCCGACGAACAAGCATTGGCATATGCTGCCGCCGCCTATGGTTTTATGCTTATAGAACGTACCTCGGGCTACATAGTCATTGACATCCATGGAGAAAGACAAAGGTTCAATGTCTTAGGTTTACATGAATTTGATAGTGATCGGAAAAGGATGTCAGTTATACTGGGGTATGCTGATAACTCCATGAAACTTTTTGTCAAAGGGGCAGATACATCCATGCTTACTGTGATGGATAAAAAATTGAACGACATAATACAAGCAACTGAAGCCCATCTTCACTCTTATTCCTCGATTGGTTTGAGGACACTTGTTATCGGAACACGAGACTTGAATGCTTCAGAGTTTGAGCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGAAGGGCTGCTATGCTTCGCAAGGTTGCTCTCAATGTAGAGAACAATCTATGCATACTCGGTGCAACTGCTATTGAAGATAAATTGCAGCAAGGTGTGCCGGAATCTATTGAGTCTTTAAGGACTGCGGGTATCAAAGTTTGGGTATTGACAGGGGACAAACAGGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTCCTAACAAGCAACATGAATCAAGTTATAATTAATAGCAACAATAGAGAGTCATGTAGAAGGTGTATACAAGATGCTCTTGTCATGTCTAGAAAACTCACGACTTCTTCTGTAGTTTCTAACAGTTCTAATGCTGTTACCACCCAGATAGCCTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGACAGCGAACTTGAAGAAAAGCTCTTTCGACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCATTGCAGAAGGCTGGGATTGTTGCCCTTGTGAAGAATAGGACGACCGATATGACACTAGCCATTGGGGATGGTGCAAATGATGTCTCAATGATCCAAATGGCCGATGTTGGAGTTGGCATCAGTGGGCAGGAGGGCCGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTATTATTGATACATGGACACTGGAATTACCAACGCATGGGTTACATGATACTATACAATTTTTACAGAAATGCTATCTTTGTTCTTGTCCTATTTTGGTATGTGTTCTTCACAGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAGTCTACACCTCATTGCCAACTATTGCTGTCGGTATCCTTGACAAAGATCTTAGCAAAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGAGCAGGGCAGAGACAAGAGACTTACAACAAAAAGCTATTTTGGTTGACGATTGCTGATACTTTGTGGCAAAGCATTATTGTCTTCTTCGGTCCTCTCGTCGCATATTGGGAAAGCACTGTTGATACAGCAAGCATAGGAAATCTTTGGACTCTTTCGGTGGTTATTTTGGTTAATGTACACTTGGCCATGGATGTTATCAGGTGGAATTGGATTTCTCATGCAACCATTTGGGGGTCTATCATTGTGACTTTCATTTCTGCCATGATTATTGATGCTATACCATCATTTCCTGGTTACTGGGCAATGTTTCATGTTGCAGGAACTGGATTATTCTGGTTATGTTTGGTTGGAACAGTGATAACAGCATTGCTTCCTCGTTTTGTTGTAAAATATGTATATCAATATTATTTTCCCAATGATATTCAGATTTCAAGAGAAGCTGAAAAATTTGGGAACACAAGAGACAATGAAAGTGGACAAATAGAAATGAATTCAATGTCAGATGCTCCACAAAGATGA 3540 0.4056 MENRNSVENSSNIESTTNNSASRRSIMSNHSRGSGRNSIREVTFDQSGSKPVRYGSKGGADSEFLSMSQKEFSDEDARLIYIDDPERTNEKFGFAGNSVRTGKYSILSFVPRNLFEQFHRVAYIYFLIIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLASVLVNGQFQGKKWKDVRVGEVIKVIANETMPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHSKLPENGKYNGFIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCELKNTSWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNFEIIILSFFLVALCTVASICAAVWLKRNKNKLNLLPYYRKLDVSKGKEEHYEYYGWGMEILFTFLMAVIVYQVMIPISLYISMELVRVGQAYFMIGDSRMYDEATDSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIRGVDYNFPKVSVENEQVEYFVQVDGKVLKPKMKVKVNPELLQLSKSGFGSKEGKWIYDFLLALAACNTIVPLEVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGYIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGYADNSMKLFVKGADTSMLTVMDKKLNDIIQATEAHLHSYSSIGLRTLVIGTRDLNASEFEQWHFAFEAASTALIGRAAMLRKVALNVENNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSNMNQVIINSNNRESCRRCIQDALVMSRKLTTSSVVSNSSNAVTTQIALIIDGTSLVYILDSELEEKLFRLASRCSVVLCCRVAPLQKAGIVALVKNRTTDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRMGYMILYNFYRNAIFVLVLFWYVFFTAFTLTTAINEWSSMLYSIVYTSLPTIAVGILDKDLSKRTLLKYPQLYGAGQRQETYNKKLFWLTIADTLWQSIIVFFGPLVAYWESTVDTASIGNLWTLSVVILVNVHLAMDVIRWNWISHATIWGSIIVTFISAMIIDAIPSFPGYWAMFHVAGTGLFWLCLVGTVITALLPRFVVKYVYQYYFPNDIQISREAEKFGNTRDNESGQIEMNSMSDAPQR* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1292 1179 Pfam Phospholipid-translocating ATPase N-terminal 80 145 IPR032631 -
Lan8g1292 1179 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Lan8g1292 1179 SUPERFAMILY HAD-like 451 919 IPR036412 -
Lan8g1292 1179 Gene3D - 719 918 IPR023214 -
Lan8g1292 1179 Gene3D - 154 321 - -
Lan8g1292 1179 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1145 IPR023298 -
Lan8g1292 1179 SFLD p-type atpase 448 929 IPR044492 -
Lan8g1292 1179 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 11 1179 - -
Lan8g1292 1179 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 735 IPR023299 GO:0000166
Lan8g1292 1179 Gene3D - 544 697 IPR023299 GO:0000166
Lan8g1292 1179 MobiDBLite consensus disorder prediction 1 45 - -
Lan8g1292 1179 SFLD Haloacid Dehalogenase 448 929 - -
Lan8g1292 1179 CDD P-type_ATPase_APLT_Dnf-like 96 1038 - -
Lan8g1292 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 849 964 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan8g1292 1179 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 485 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan8g1292 1179 SUPERFAMILY Calcium ATPase, transduction domain A 177 318 IPR008250 -
Lan8g1292 1179 Pfam Phospholipid-translocating P-type ATPase C-terminal 906 1146 IPR032630 -
Lan8g1292 1179 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 1179 - -
Lan8g1292 1179 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 94 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan8g1292 1179 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Lan8g1292 1179 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Lan8g1292 1179 MobiDBLite consensus disorder prediction 1 61 - -
Lan8g1292 1179 Pfam Cation transport ATPase (P-type) 572 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1292 Lan-Chr8 19433993 19440040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1292 1 1179 Primary Pumps ATPases AT5G04930 68.559 0.0 1716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1292 K14802 - gmx:100784988 1936.38