Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1279 ATGGCTGATCCAAGGTTCGTTGTTCCATATCGTGACCCCTATGATACTCCACTTAGCCCAAGCATTTTCAATTTGACAAACCCCACAATATCTGATTTATCAAACAATGTTAACAATAATTATAATGGACTCGTTCCACTGCCGCAACAAATTGAATATGGAGATGGAAATGGAGTTCAAGGGGTTAATCATCCATTACTTGACCCAATGATGAGTAATTATTATTTTCCAAATGGAGGAAATGGAAACAACAACAACTTTGAATCACAAGTGAATGTGGGTCCAAGTCAGCCACCAAATTGGAACTTCTTAGGGTTACAGAATTTTAGCAACATGGAAGTGATGTCACTTCCATGTTGGCCAGACTCACCATCACCTTTTAGTTGCTCTTGTTGTCAAGTTTTAAGAGAGATAATTCACACCAATGGTTTTACCTTCAACAAACTTGAGATTGATGGAAGGCTTGGTATAATGTGTCATGCAATTCATCACCAGAATATCAATGGGAATATCAATGGGGCTTCTTCAAGTAACCCTCAATTTCAAATGATTGATTTTACCATGAAAAACATCCAAGAAATCAAGAATTTTCTAGTGCAATACTGTCTGGGGCAAAATACATCAGGCTACGTTATGGTGCAAGATCCATTGTCTTCCTATTATGAAGCCCTGTGCATTGGACTAGACTGGGCTGAAGACTTGAATGACTATATCGACATGAATCCAAATGGTTCAGGAGGACCATCCGATGAAATGGAACAAGAGGTTGACAATGGAAGGGCTCGTAGGCCTAGCCTTTCAGAACAGAAAGAGAGAATAGCGAAGATGAAATTAAGTGATTTAAGGGATTACTTTCATCTACCTATTGAGGAAGCAGCTAGGAAGTTGAACGTATGTTCTAGTGTCGTGAAGGGAGTTTGTCGTAGAGAAGGAGTAAAAAGATGGCCTCAAAGAAAGATCACAAGCATTGTGAAGCAGATGACAGTGCTGAAAAGAACATTAAATTCAGCAGATGCAAGTACAAGGGCAAGAACTGAGGCAGAAATTAACAAACTTGAAGAAGAAATGAAGGGGCTTTGTGGTGGAATTTCCCCAACCGCAATAAATTACTCATGA 1116 0.3934 MADPRFVVPYRDPYDTPLSPSIFNLTNPTISDLSNNVNNNYNGLVPLPQQIEYGDGNGVQGVNHPLLDPMMSNYYFPNGGNGNNNNFESQVNVGPSQPPNWNFLGLQNFSNMEVMSLPCWPDSPSPFSCSCCQVLREIIHTNGFTFNKLEIDGRLGIMCHAIHHQNINGNINGASSSNPQFQMIDFTMKNIQEIKNFLVQYCLGQNTSGYVMVQDPLSSYYEALCIGLDWAEDLNDYIDMNPNGSGGPSDEMEQEVDNGRARRPSLSEQKERIAKMKLSDLRDYFHLPIEEAARKLNVCSSVVKGVCRREGVKRWPQRKITSIVKQMTVLKRTLNSADASTRARTEAEINKLEEEMKGLCGGISPTAINYS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1279 371 MobiDBLite consensus disorder prediction 253 269 - -
Lan8g1279 371 PANTHER PROTEIN RKD4 5 362 IPR044607 GO:0003700
Lan8g1279 371 MobiDBLite consensus disorder prediction 241 269 - -
Lan8g1279 371 Pfam RWP-RK domain 276 323 IPR003035 -
Lan8g1279 371 Coils Coil 335 362 - -
Lan8g1279 371 ProSiteProfiles RWP-RK domain profile. 257 343 IPR003035 -
Lan8g1279 371 PANTHER RWP-RK DOMAIN PROTEIN 5 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1279 Lan-Chr8 19301089 19303502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1279 231 340 NLP Transcription Factor Family AT1G64530 31.746 2.27e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lan8g1279 RWP-RK 4.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1279 - - lang:109354161 718.768