Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1277 ATGGAAAAATTGTATTCAGCTGTTGTTTTTGTTTTTCTTTGCCTTAGTGGTATTTCTCTTATTGAGGCTCTAGGCTTTGGTGTTGAACTCATTCATCGTGAATCTTCAACATCACCATTTTATCTTTATAGTGAAACTCATTTCCAACGAGTTGCCAATGCTATTCGTCGTTCCATAAACCGTCCTAATTATTTGAAACAAAGTTCTTTATCGCCGAACAGTATTGAGTCTGATGTATTTCCTAATCAAGGTGAATACCTAATGAGTTACTCAATAGGAACCCCACCCGTGAAAACCTTAGGTATTGTTGACACAGGAAGTAACGTTATTTGGTTGCAATGCCAACCTTGTCACCCATGTTACAAACAAACCTTTCCAATATTTAACCCCTCAAAGTCCAAGACATATAAATTCCTTCCTTGCATATCTAATATATGCGAATTGACGAGAGATACTTCTTGCTCTTCAGATCGTCGTAAAAGTTGTCAATATATTATCCGATATGGGGATAATTCAACATCACAGGGAGATCTAAGTTTGGATACTTTTACTTTAAGTTCCACTAACGGCTCTTCAATCCAATTACGTAACACTGTGATCGGATGTGGACATAGTAACACCTTGGTTTTTCAAGGTGATGGCTCCGGTATAGTTGGTATTGGAAATGGACCCGCTTCACTTATAACTCAACTCGGTTCTTCAATAAAAGGCAAATTCTCATACTGTTTGTTGCCATTATTTACAAACTCTAAGTTCTCAAGCAAACTCATCTTTGGAGATGATAAAAATGCCTTTTCTAGTAAAGGTAGCGTCTCAACTCCAATAGTCCCAGATGCTGATTTCTACAGACTAAACTTGTTAAGTTTTACTGTGGGAGACACCAAAATAGAATTTGAAAGTTCCTCGGATGGTAACATCATAATTGACTCGGGAACGACATTGACTCTTTTACCACCTGACGTCTACTCTAAGTTGGAATCAGCAGTAGCATCTGCAATTCCATCAGAGCCCATTGAAGACCCTTCAGGAACATTGAGCCTTTGCTACAAAACAAGTAAAAATTTGGATATTCCAATAATCACAGCAAATTTTGATGGTGCAGATGTGAAGTTGACTGCTCTCAACACATTTATTGAAATTAGTGAGGGTGTTACATGTTTTTCTTTCATTCCGTCAATAATTTCCATCTTTGGGAATTTGGCACAACAAAACTTTTTGATTGGCTATGATGTTAAAAACCAACTTCTCACCTTTAAGCCCACTGATTGCAGCAAACAGTGA 1281 0.3747 MEKLYSAVVFVFLCLSGISLIEALGFGVELIHRESSTSPFYLYSETHFQRVANAIRRSINRPNYLKQSSLSPNSIESDVFPNQGEYLMSYSIGTPPVKTLGIVDTGSNVIWLQCQPCHPCYKQTFPIFNPSKSKTYKFLPCISNICELTRDTSCSSDRRKSCQYIIRYGDNSTSQGDLSLDTFTLSSTNGSSIQLRNTVIGCGHSNTLVFQGDGSGIVGIGNGPASLITQLGSSIKGKFSYCLLPLFTNSKFSSKLIFGDDKNAFSSKGSVSTPIVPDADFYRLNLLSFTVGDTKIEFESSSDGNIIIDSGTTLTLLPPDVYSKLESAVASAIPSEPIEDPSGTLSLCYKTSKNLDIPIITANFDGADVKLTALNTFIEISEGVTCFSFIPSIISIFGNLAQQNFLIGYDVKNQLLTFKPTDCSKQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1277 426 Gene3D Acid Proteases 65 260 IPR021109 -
Lan8g1277 426 ProSiteProfiles Peptidase family A1 domain profile. 86 419 IPR033121 -
Lan8g1277 426 Gene3D Acid Proteases 263 426 IPR021109 -
Lan8g1277 426 SUPERFAMILY Acid proteases 81 424 IPR021109 -
Lan8g1277 426 Pfam Xylanase inhibitor C-terminal 282 419 IPR032799 -
Lan8g1277 426 PANTHER OS07G0603500 PROTEIN-RELATED 3 424 - -
Lan8g1277 426 Pfam Xylanase inhibitor N-terminal 86 260 IPR032861 -
Lan8g1277 426 CDD pepsin_A_like_plant 85 423 IPR034161 -
Lan8g1277 426 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 3 424 - -
Lan8g1277 426 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 306 317 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1277 Lan-Chr8 19269862 19271181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1277 75 425 Miscellaneous Gene Families AT1G77480 26.042 7.67e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1277 - - gmx:100789696 483.026