Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1258 ATGGCTCATAAAACGGAAAAGGAGGAGACGGAGTTTAAGAAGGTTACGGAAACCATTACCATAACACCGTGCGTTAATAACTGCGGCGTTACCGTTAACCCTTCCACCAATAACAACATGTGCCAGAAGTGTTTTAACGCAACCACCGCTGCGATCTCACCACCGCCTTCTAGATTCTCCGACGGTGAAGCTACAGCTACGACCAGATCTGCCACGTCATCACGCTCGCCGAAGAGATCTCACCCTTCCGACGAAGATGAAACCGCTACGCAACCGGATCAACCGAGATCTAATGATTTGATGCTGTCTGAGGCTAAGCGCGTGGTGAATCGGTGCTCCGGTTGCCGGAAGAGAGTCGGTCTGACCGGATTCCGGTGCAGGTGCGGCGAGCTTTTCTGTTCTCAGCATAGGTACTCCGATCGCCATGATTGTAGCTACGATTATAAAACCGCCGGACGGGAAGCCATAGCGAGGGAGAATCCGGTGGTTAAAGCTGCGAAGATTGTCAAAGTCTGA 516 0.5174 MAHKTEKEETEFKKVTETITITPCVNNCGVTVNPSTNNNMCQKCFNATTAAISPPPSRFSDGEATATTRSATSSRSPKRSHPSDEDETATQPDQPRSNDLMLSEAKRVVNRCSGCRKRVGLTGFRCRCGELFCSQHRYSDRHDCSYDYKTAGREAIARENPVVKAAKIVKV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1258 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Lan8g1258 171 Pfam AN1-like Zinc finger 112 149 IPR000058 GO:0008270
Lan8g1258 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Lan8g1258 171 SUPERFAMILY AN1-like Zinc finger 98 165 IPR035896 -
Lan8g1258 171 Gene3D - 67 167 IPR035896 -
Lan8g1258 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 171 - -
Lan8g1258 171 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 171 - -
Lan8g1258 171 MobiDBLite consensus disorder prediction 55 99 - -
Lan8g1258 171 MobiDBLite consensus disorder prediction 78 92 - -
Lan8g1258 171 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1258 Lan-Chr8 18951931 18952935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1258 110 171 C2H2 Transcription Factor Family AT3G52800 67.742 6.96e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1258 - - adu:107463072 225.713