Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1256 ATGGACAAGGGAACACCACCTAGCCTCTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGACAAGGGAAAGAATGCCAAATTAGAGGAGTCTAAACCAATTAAAGTTGTTTCAGGATCCTTGTCTTCTCCCTCCATTCGTAAGGCTAATGATACACAGAAACCTTCTCAGGCTGGTTCCGGTGGAAAGCTTGCTTTCAGTTTAAAACAAAAGTCAAAGCTAGTACCACCCCCTGTTAAGTTAGCAGATGATGATGATGAAGAAACAGATGCTGGGGATGTTTCAAACGATGCACCGCTGAAACGGCAAAAATTGGGCCAGGAGGATGGCACCGAGCAGTCATTGAGACATCTTGATGTTGCACCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTTGCTGAAAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGCCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATAAAAAATGCGCTGAATACAAATATTATGAACATCGGCTTGCTCAAGAGGAAAAGGCTCTTGCACAGTCCAGGGAACCACAGGCCCATCACACTGGGGGTTCAAACATTTCATCTTCCAGGCCATCAAATGGTCCTCAGAAGTCGTCTCAGCAACATTCAACCTACCAAATCCCAGCTTCTGTTTTATATGGACGTACTCAAGAACCATGGTCTTCTGGATCTTCAGTTCAAGCATCATCAGCAGGAAGCACTGATGAACCCAGTGGATCATCCAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGGGCTGCACAGGAAGAGAGGTCGAAACGACCTAAGTATTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCAGCTTCTGGGAAGAAAGGCCATCACATGGGGGATTACATTCCCCTAGAAGAACTTGAGAAGTTCATGGCTACCTGTAATGACGCAGAAGCACAGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGCAGCTCTAGGAAGGGTATTGCAGATCCTATCATGGCAGGCAGTGTTAAGAAAGATAACTTGGGGGTTGGTGCTGTTCAACCTGGAGAGGTGACTCCTGAGGATGACATATATGAACAGTACAAAAAGCGGATGATGCTCGGCTATCGTCACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1299 0.4473 MDKGTPPSLFVNDGSFMERFKQLQQEQDKGKNAKLEESKPIKVVSGSLSSPSIRKANDTQKPSQAGSGGKLAFSLKQKSKLVPPPVKLADDDDEETDAGDVSNDAPLKRQKLGQEDGTEQSLRHLDVAPSSPSDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDKKCAEYKYYEHRLAQEEKALAQSREPQAHHTGGSNISSSRPSNGPQKSSQQHSTYQIPASVLYGRTQEPWSSGSSVQASSAGSTDEPSGSSNADSLALMEFYMKRAAQEERSKRPKYSKDEMPPPASLQAASGKKGHHMGDYIPLEELEKFMATCNDAEAQKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1256 432 Pfam Surp module 140 189 IPR000061 GO:0003723|GO:0006396
Lan8g1256 432 SMART G-patch_5 347 394 IPR000467 GO:0003676
Lan8g1256 432 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 432 IPR040169 -
Lan8g1256 432 SMART surpneu2 138 192 IPR000061 GO:0003723|GO:0006396
Lan8g1256 432 ProSiteProfiles G-patch domain profile. 349 396 IPR000467 GO:0003676
Lan8g1256 432 Coils Coil 322 342 - -
Lan8g1256 432 MobiDBLite consensus disorder prediction 278 294 - -
Lan8g1256 432 MobiDBLite consensus disorder prediction 191 313 - -
Lan8g1256 432 MobiDBLite consensus disorder prediction 43 67 - -
Lan8g1256 432 ProSiteProfiles SURP motif repeat profile. 140 183 IPR000061 GO:0003723|GO:0006396
Lan8g1256 432 MobiDBLite consensus disorder prediction 151 170 - -
Lan8g1256 432 SUPERFAMILY Surp module (SWAP domain) 122 191 IPR035967 GO:0003723|GO:0006396
Lan8g1256 432 Gene3D Surp module 112 196 IPR035967 GO:0003723|GO:0006396
Lan8g1256 432 MobiDBLite consensus disorder prediction 23 138 - -
Lan8g1256 432 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 432 - -
Lan8g1256 432 MobiDBLite consensus disorder prediction 23 38 - -
Lan8g1256 432 Pfam G-patch domain 350 393 IPR000467 GO:0003676
Lan8g1256 432 MobiDBLite consensus disorder prediction 101 122 - -
Lan8g1256 432 MobiDBLite consensus disorder prediction 201 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1256 Lan-Chr8 18913146 18919429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1256 278 432 C2H2 Transcription Factor Family AT5G26610 27.841 7.36e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1256 K13096 - gmx:100786213 671.389