Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1255 ATGGCTTACTCACAAATCGATTCGGATGGAGGAATTGACTACATGTTCAAGATTGTCTTGATGGGGGATTCTGGGGTTGGTAAGTCTCAGCTTTTGCATCGGTTTGTAAAAAATGAATTCAACTTGAAATCCAAATCCACAATTGGGGTTGAGTTTCTCACCAAGACTGTTGTCATGGATCACAAAGTTGTCAAGGCTCAGATTTGGGACACTGCTGGTCAAGAAAGGTACCAAGCCATTACAACTGCATATTACAGAGGTGCAATTGGCGCTTTAGTAGCGTATGACATAACCAGGCGCGAATCCTTTGATCATGTTGAAAAGTGGCTGGAGGAGCTTAAGATTCATGCTGATAAAAACATAGCTATCATGCTTGTTGGCAACAAGTCGGACCTGAGTTCTACTCGCGAAGTGCCTACTGAGGTTGCTGAAGAATTTGCCCGGCAGCAAGATCTCTTCTTCACTGAGACGTCAGCACTTGACTCTACCAATGTGGAGTCAGCTTTCCACGGTCTCCTCTGTCAAGTATATGAAAATGTCATTAAGAAGCACATCACAGCAGATGGACATGAACCAAATTGGGATAAAGTAAACCTTGAACTTGAAGGAATAAAAATCAAGGTCCAATCTGAAGAACATGAATACCAGAAAGATAAAAAGAAATTCGAATGTTGTACTGTTATTTAG 687 0.4163 MAYSQIDSDGGIDYMFKIVLMGDSGVGKSQLLHRFVKNEFNLKSKSTIGVEFLTKTVVMDHKVVKAQIWDTAGQERYQAITTAYYRGAIGALVAYDITRRESFDHVEKWLEELKIHADKNIAIMLVGNKSDLSSTREVPTEVAEEFARQQDLFFTETSALDSTNVESAFHGLLCQVYENVIKKHITADGHEPNWDKVNLELEGIKIKVQSEEHEYQKDKKKFECCTVI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1255 228 SMART ran_sub_2 21 222 - -
Lan8g1255 228 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 226 - -
Lan8g1255 228 SMART rho_sub_3 18 179 IPR001806 GO:0003924|GO:0005525
Lan8g1255 228 PRINTS Transforming protein P21 ras signature 16 37 - -
Lan8g1255 228 PRINTS Transforming protein P21 ras signature 39 55 - -
Lan8g1255 228 PRINTS Transforming protein P21 ras signature 57 79 - -
Lan8g1255 228 PRINTS Transforming protein P21 ras signature 119 132 - -
Lan8g1255 228 PRINTS Transforming protein P21 ras signature 154 176 - -
Lan8g1255 228 ProSiteProfiles small GTPase Ras family profile. 4 228 IPR001806 GO:0003924|GO:0005525
Lan8g1255 228 Gene3D - 10 225 IPR027417 -
Lan8g1255 228 TIGRFAM small_GTP: small GTP-binding protein domain 14 170 IPR005225 GO:0005525
Lan8g1255 228 CDD Rab11_like 13 177 - -
Lan8g1255 228 ProSiteProfiles small GTPase Rho family profile. 9 187 - -
Lan8g1255 228 PANTHER - 1 226 - -
Lan8g1255 228 SMART ras_sub_4 16 179 - -
Lan8g1255 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 183 IPR027417 -
Lan8g1255 228 SMART rab_sub_5 16 179 - -
Lan8g1255 228 Pfam Ras family 17 176 IPR001806 GO:0003924|GO:0005525
Lan8g1255 228 ProSiteProfiles small GTPase Rab1 family profile. 11 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1255 Lan-Chr8 18884338 18886555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1255 K07904 - gmx:100789008 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1255 8 18884338 18886555 Lan13g0719 13 7094449 7097417 LSH