Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1254 ATGAAACTGGTAGTTGAGGTTATTAATGCTCACAATCTTATGCCAAAAGATGGTGAGGGATCAGCAAGTCCATTCGTAGAAATAGACTTCGAAAACCAGCTGAGCCGAACCCGAACTGTACCGAAGAACCTCAACCCCACTTGGAATCACAAACTAGTGTTTCATATAGATGCAACCAAGCCTTACCATCGCCAAACCATTGAAGTCTCAGTCTACAACGATAGAAAGAGACCTATTCCTGGCCGAAACTTCCTCGGGAGGGTAAGAATTCCATGCTCTAATATTGTCAAGGAAGGTGAGGAAGTTTATCAAACTTTCCCACTAGAAAACAAGTGGATTTTCTCATCTGTGAAGGGTGAAATTGGCCTCAAAATATACATCGCATCTGAATCCAAACCTAAAGCTCTATCATCCTTTCCTTCATCAGAACTAGACAAACTCTTACCTTCTACTCCACCACAAGTACCACAATCCACTACTAACCTTCCTCCCCCTCCTCCTCATAGTACTCCCTCAGCCACTAAAAACACAGGCCGAACTGACATAACATTAGAAACAGATCCCGGAGTAGAAGGAATCACACTTAAAACCTCGAAAGCGACCACAGAAGAAGCATCTCAGTCTAGTGGCATTGATATTGATAAAGGACCAGAGAAGGAAATCACAGAACAACTACACAAACACCAAGTTATGCAGCAGCCAAGGATTTCAATAAAGAAACAACCACAAGATACTTCATACACAATGCACTCAGTTACACCTCAAGTTCATCCTAGCCATGATGGAAACTATGCTCACAATGAAACCAATCCACAACCAAGGATTTCAATAAGGAGACGACCACAACAACAAGAAGGTCCATTCACAATGCACTCAGTTAATCATCAAGTACATCCTAGCCATGATGAAAGCTACAATCTCAAGAACAATAACGTGCAGCCAAGGTTTTCAGTAGAGAGACAAACACAAGGTACTCCACTAACGATGCACCCAGTTAATTCTCAAGTTCATCCTAGCCATGGCGGAAGCTATTCTCACAACGACATGAACCAGCAGCCGAGGATTTCAATAAAGAGACGACCACAAGCACAGAGTTCTCCATTCACAATGCACTCAGTTAATAATCCTCAAGTCTATCCTAGCCATGACGAAAGCTACAATCTTAGGAACACGAACCCAGAGCCAAGGATTTCAATAGAGAGACAAACACAAGGTACTCCACTCGCAAGGCACCCAGTTAATAATTTTCAAGTCCATAGTGATGATGGAAACTATAATCTCAAGGACACCAATCCACAGCTTGGTGGAAGAGGGTTGATGAGTGGTAGTGAAAGATTCGCAAGCACATATGACCTTGTTGAGCAGATGTTTTATCTGTATGTACGTGTCGTGAAAGCAAAAGATCTCAAACCAGGCACCATCACCTCCAGTTGTGATCCTTATGTGGAAGTGAAGCTAGGGAACTATAAAGGAAGAACAAAGCACTTTGAGAAGAAATCGAATCCGGAGTGGAACCAAGTCTTTGCTTTCTCCAAAGACCGCATTCAATCATCCATTCTAGAAGTTCATGTGAAAGATAAGGAAATGCTGGGGAGAGATGACTATCTTGGAAGGGTGGTTTTTGACATGAATGAAGTTCCAACAAGAGTTCCACCAGATAGCCCACTCGCTCCTCAATGGTACAGACTTGAGGACTGGAGAGGAGATGGGAAGGTGAGAGGTGATGTTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAAGCTTTCTCAGAAGCTTGGCATTCTGATGCTGCCACTGTCTATGGAGAAGGTGTTTTCAACATCAGATCAAAGGTTTACGTATCACCAAAACTGTGGTATCTTAGGGTCGATGTCATTGAAGCTCAAGATGTGATACCTAGTGACAGAAATCGCCTGCCAGAGGTTTTTGTGAAGGCTCAAGTTGGCTGCCAAGTATTGAAAACCAAGATTTGTCCTACTAGAACAACCACACCGTTATGGAATGAAGATTTAGTTTTTGTGACAGCAGAACCATTTGAGGAGCAATTGATCATTACTGTGGAGGATCATGTGCACCCTTCAAAAGATGAGGTTCTTGGGAAGATAAGCCTACCAATGTCCGTCTTTGAGAAGCGGCTAGACCATAGGCCAGTTCATTCTCGTTGGTTCAATCTTGAGAAATTTGGTTTTGGTGTGATAGAAAATGATAGAAATAATGAGCTTAAGTTTTCTAGCAAGGTTCACCTGAGAGTTTGCCTTGAAGGTGGATACCATGTCCTAGACGAATCGACATTGTACATTAGCGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCTATAGGGATACTTGAAGTAGGTATCTTAGGAGCACAAGGGCTTCCCCCAATGAAGATGAAGGATAGCCGCGGCAGCACAGATCCATACTGTGTCGCTAAATATGGCCAGAAATGGGTCCGAACAAGAACACTTATTGACACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGAGTTTTTGACAACTGCCATTTGGGTGGAGGGGAAAAAGGTCCTGGTGGCAGAGCAGCCCGAGATACTCAAATTGGAAAGGTAAGGATTCGGCTCTCAACACTAGAAGTTCATAAGATATACACCAATTCTTATCCTCTCCTTGTTTTAAATCCGCACGGAGTCAAAAAGATGGGTGAACTTCAGCTAGCAGTGAGATTCACAACACTGTCACTAGCTAATACGGTTTACACTTATGGTCAGCCCTTGCTTCCGAAGATGCATTACTTACATCCTTTCACAGTTAACCAAATAGACAACTTAAGGTACCAAGCCATGAATATTGTAGCTATGAGGCTTGGCAGATCTGAACCACCTCTTAGGAAGGAGGTGGTGGAGTACATGTTGGATGTTAATTCCCATGTTTGGAGCATGAGAAGAAGCAAGGCTAACTTCTTTCGCGTAATGTCCCTTTTCTCTAGCATGATCACAATGGGTAAATGGTTCATTGATGTTTGCAATTGGAAGAACCACATCACATCAGTTCTAGTACATATTCTTTTTCTCATACTGATATGGTACCCCGAATTGATACTTCCCACTGTGTTTCTCTACATTTTCTTGATCGGTCTGTGGAACTATAGGTACCGTCCTAGACACCCGCCCCACATGGATACTAAACTCTCATGGGCAGAAGCTGTCCACCCCGATGAACTTGACGAAGAGTTCGACACATTCCCAACTTCTAGATCACATGATGTAGTGAGAATGAGGTATGACAGGCTTAGAAGTGTTGCAGGTAGGATTCAGACCGTTGTCGGAGACATAGCTACACAGGGAGAGAGATTTCAATCTCTACTGAGTTGGAGAGACCCTAGAGCAACTAGCCTCTTTCTAATATTTAGCTTTTGTGCAGCTTTGGTTCTCTATGCAGTGCCATTCAGGGTGGTGACTTTGGTAGCAGGTCTGTATTATTTGAGACATCCAAAGTTTAGGAGCAAGCTACCTTCTGTACCTAGTAATTTCTTCAAGAGACTATCAGCTAGAACAGATAGTTTACTATAA 3597 0.4295 MKLVVEVINAHNLMPKDGEGSASPFVEIDFENQLSRTRTVPKNLNPTWNHKLVFHIDATKPYHRQTIEVSVYNDRKRPIPGRNFLGRVRIPCSNIVKEGEEVYQTFPLENKWIFSSVKGEIGLKIYIASESKPKALSSFPSSELDKLLPSTPPQVPQSTTNLPPPPPHSTPSATKNTGRTDITLETDPGVEGITLKTSKATTEEASQSSGIDIDKGPEKEITEQLHKHQVMQQPRISIKKQPQDTSYTMHSVTPQVHPSHDGNYAHNETNPQPRISIRRRPQQQEGPFTMHSVNHQVHPSHDESYNLKNNNVQPRFSVERQTQGTPLTMHPVNSQVHPSHGGSYSHNDMNQQPRISIKRRPQAQSSPFTMHSVNNPQVYPSHDESYNLRNTNPEPRISIERQTQGTPLARHPVNNFQVHSDDGNYNLKDTNPQLGGRGLMSGSERFASTYDLVEQMFYLYVRVVKAKDLKPGTITSSCDPYVEVKLGNYKGRTKHFEKKSNPEWNQVFAFSKDRIQSSILEVHVKDKEMLGRDDYLGRVVFDMNEVPTRVPPDSPLAPQWYRLEDWRGDGKVRGDVMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVDVIEAQDVIPSDRNRLPEVFVKAQVGCQVLKTKICPTRTTTPLWNEDLVFVTAEPFEEQLIITVEDHVHPSKDEVLGKISLPMSVFEKRLDHRPVHSRWFNLEKFGFGVIENDRNNELKFSSKVHLRVCLEGGYHVLDESTLYISDQRPTARQLWKQPIGILEVGILGAQGLPPMKMKDSRGSTDPYCVAKYGQKWVRTRTLIDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKGPGGRAARDTQIGKVRIRLSTLEVHKIYTNSYPLLVLNPHGVKKMGELQLAVRFTTLSLANTVYTYGQPLLPKMHYLHPFTVNQIDNLRYQAMNIVAMRLGRSEPPLRKEVVEYMLDVNSHVWSMRRSKANFFRVMSLFSSMITMGKWFIDVCNWKNHITSVLVHILFLILIWYPELILPTVFLYIFLIGLWNYRYRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSHDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDPRATSLFLIFSFCAALVLYAVPFRVVTLVAGLYYLRHPKFRSKLPSVPSNFFKRLSARTDSLL* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1254 1198 Gene3D C2 domain 608 753 IPR035892 -
Lan8g1254 1198 Gene3D C2 domain 765 922 IPR035892 -
Lan8g1254 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 620 775 IPR035892 -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 326 382 - -
Lan8g1254 1198 CDD C2B_MCTP_PRT_plant 458 584 - -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 138 217 - -
Lan8g1254 1198 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 3 126 - -
Lan8g1254 1198 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 414 1198 - -
Lan8g1254 1198 ProSiteProfiles C2 domain profile. 762 896 IPR000008 -
Lan8g1254 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Lan8g1254 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 458 598 IPR035892 -
Lan8g1254 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 784 920 IPR035892 -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 249 276 - -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 156 171 - -
Lan8g1254 1198 Gene3D C2 domain 454 600 IPR035892 -
Lan8g1254 1198 Gene3D C2 domain 1 143 IPR035892 -
Lan8g1254 1198 CDD C2A_MCTP_PRT_plant 2 129 - -
Lan8g1254 1198 Pfam C2 domain 458 561 IPR000008 -
Lan8g1254 1198 Pfam C2 domain 784 898 IPR000008 -
Lan8g1254 1198 Pfam C2 domain 2 108 IPR000008 -
Lan8g1254 1198 Pfam C2 domain 620 726 IPR000008 -
Lan8g1254 1198 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 126 - -
Lan8g1254 1198 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 414 1198 - -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 138 155 - -
Lan8g1254 1198 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Lan8g1254 1198 ProSiteProfiles C2 domain profile. 601 724 IPR000008 -
Lan8g1254 1198 Pfam Plant phosphoribosyltransferase C-terminal 1043 1198 IPR013583 -
Lan8g1254 1198 MobiDBLite consensus disorder prediction 195 209 - -
Lan8g1254 1198 ProSiteProfiles C2 domain profile. 440 561 IPR000008 -
Lan8g1254 1198 CDD C2D_MCTP_PRT_plant 785 915 - -
Lan8g1254 1198 SMART C2_3c 2 104 IPR000008 -
Lan8g1254 1198 SMART C2_3c 458 555 IPR000008 -
Lan8g1254 1198 SMART C2_3c 621 719 IPR000008 -
Lan8g1254 1198 SMART C2_3c 785 895 IPR000008 -
Lan8g1254 1198 CDD C2C_MCTP_PRT_plant 621 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1254 Lan-Chr8 18862183 18866433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1254 2 260 Lipid Metabolism Gene Families AT5G48060 41.573 6.72e-48 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1254 - - lang:109353427 2432.52