Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1253 ATGTGGATATTTAATCCTTTCATGCAAAAAGAGCCTTCTGGCCTTGAAGGTCGGACTATAGATGTCGGCAATCTTAAAATAAATGTCCAGAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACGTGGTTCGTGATGCTGTACATATGTCAAAGCTGTATGCTTTGAAGCACATAATATGTAATGATGACGAATCACTTGGATTGGTAAAGAAGGAGATATCTGTGATGAAGTCATTGAAAGGACATCCCAATGTGGTCACACTTTATGCGCATGCAATCATTGATATGGGTAGGACAAAGGAGGCATTTCTCGTGATGGAATTTTGTGAGAAGTCCCTGGTTAATGTTCTGGAGAACCGAGGAGCTGCATATTTTGATGAGAAACAGGTTTTTGCAATCTTCAGAGATGCATGTAATGCAGTTTTTGCTATGCACTGCCAGTCCCCACCTATTGCCCACCGAGACTTGAAAGCTGAGAATCTTTTAATAGGTTCAAATGGTTTATGGAAGTTGTGTGATTTTGGAAGCACTTCCACCAATCACAAGCGTTTCGAGAAGCTAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACGACCCCAGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTAAGAGAAATGATTAACGAGAAAGTGGACATATGGGCGCTCGGGTGTCTCCTTTTTCGAATATGCTACTTCAAAAGTGCATTTGATGGAGAATCGAAGCTGCAAGTCTTGAATGGAAACTATCGCATTCCTGATTTACCAAAATACACTTCATCTGTTACAGACTTAATCAGAGAAATGCTTCAAGCTAGACCAGATGACAGACCAGATATCATGCAGGTCTGGCTTCGTGTTAATCAGCAGCTACCTATTCATTTGCATAAGAAACTACCTGACAGACCACCTGGATTGCCCTCTTCTAACAAGCATGAAGATGAAGAACTTTTTTCCGACTTCGGTGTTTCGATCTCTGCAAATAAATCAACTTCAACGACTAGAGGGAACTCACTAGTCCTACCATCTGGAGAATCCAAAAATACATCACATCCATCTTGTTCTTCTATGGGAAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAATCTGCAAAGGATTCATTAGTCCCAGAGGAGAAGAGAAAACCCGTATTTGATGAACTGTCTAGCCACCATATCTCAATGAAACACAATAAAATTCTTCCAGACAATAATCAGCTACCCAAAACTGATACCACTAGAAAAATGGTTAATACCCAAACTCAAACTGTAAAAAGCAGCACACATGAAAAAGCATACAAGCCTGGTACTCAATTATCCAAGAAACCTGAAATTAAGTTTTCCCAGGACGACAATGTTGCTGGGGAGAGGCCAAAGTCATGTACAGAGAATGCTCTTACATTTCAAGGCCAGGATTTTAATGCCTTTGTTGCTGAATTCAGTGCCACTAACCTCGACTCTGGACCTGTTCACAAATCTGATAGGGAAGAAGCATTGGTGGCTGAGGTGGAGAAACTCAAAGAGCAGCTGAAGGTGGCTAACATGGAGAAAGCTGAAATAACTTCAAAGTATGAAAAGCTTTCTGCCATCTGTCGATCCCAAAAGCAAGAGTTACAGAATCTCAAACAAGCTCTTGCAGTGAGAACTTCACCAACCTCCCCAGCAATTCTATCATCTCCTGTTGCGAATAACACCGAAAGGAAAGCTCCTTGTTCAGAGCCAAATCAGCCAGTGTCATGGAAAGCTTTTCCAGAGGAACCTCAGTCACAAAACCCGATCAGAAATGGTGAGCATAGCATGCAACCTGCTCAACTAGTTCCTGATTTTGGGACATGGGGTTTTGGAAAAGATGACTTGGGTGCTGCACATGCCGGCAGCCCACAGATGCCAAGACCTGGTGAAGGGATCAATTCTCGGGTTTTTTCTGAGAGCAAGAAAACTTCTGAACCTGCTGGGTGGGCGGTTTTTTAA 1992 0.4307 MWIFNPFMQKEPSGLEGRTIDVGNLKINVQKAIAEGGFSCVYVVRDAVHMSKLYALKHIICNDDESLGLVKKEISVMKSLKGHPNVVTLYAHAIIDMGRTKEAFLVMEFCEKSLVNVLENRGAAYFDEKQVFAIFRDACNAVFAMHCQSPPIAHRDLKAENLLIGSNGLWKLCDFGSTSTNHKRFEKLEEMGIEEDNIRKHTTPAYRAPEMWDLFLREMINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYTSSVTDLIREMLQARPDDRPDIMQVWLRVNQQLPIHLHKKLPDRPPGLPSSNKHEDEELFSDFGVSISANKSTSTTRGNSLVLPSGESKNTSHPSCSSMGNGGQLGAFWSTQSAKDSLVPEEKRKPVFDELSSHHISMKHNKILPDNNQLPKTDTTRKMVNTQTQTVKSSTHEKAYKPGTQLSKKPEIKFSQDDNVAGERPKSCTENALTFQGQDFNAFVAEFSATNLDSGPVHKSDREEALVAEVEKLKEQLKVANMEKAEITSKYEKLSAICRSQKQELQNLKQALAVRTSPTSPAILSSPVANNTERKAPCSEPNQPVSWKAFPEEPQSQNPIRNGEHSMQPAQLVPDFGTWGFGKDDLGAAHAGSPQMPRPGEGINSRVFSESKKTSEPAGWAVF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1253 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lan8g1253 663 CDD STKc_GAK_like 26 298 - -
Lan8g1253 663 MobiDBLite consensus disorder prediction 555 579 - -
Lan8g1253 663 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1253 663 SMART serkin_6 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1253 663 MobiDBLite consensus disorder prediction 589 605 - -
Lan8g1253 663 MobiDBLite consensus disorder prediction 555 663 - -
Lan8g1253 663 MobiDBLite consensus disorder prediction 335 362 - -
Lan8g1253 663 SUPERFAMILY Protein kinase-like (PK-like) 28 310 IPR011009 -
Lan8g1253 663 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 561 - -
Lan8g1253 663 ProSiteProfiles Protein kinase domain profile. 27 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1253 663 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Lan8g1253 663 Coils Coil 503 551 - -
Lan8g1253 663 PANTHER SERINE/THREONINE PROTEIN KINASE 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1253 Lan-Chr8 18813206 18817901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1253 4 284 MAP Kinase Kinase Kinase AT4G24480 26.552 1.41e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lan8g1253 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1253 K08853 - gmx:100780879 882.478