Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1244 ATGACTTCTAGAGGCTATTATTCTTCTCCTATTACTACCTCTTCAAACTCTTCTGATTGTTGTTCTAATAGATCTGATGGGTCAGCTTCAGCTTCTACTGAACTTAAAATCTATAGAGCTTTCATATTTTCAGTTCCAATATTCTTCACTTTCATTCTCCTTTTTCTTTTCTATATCTTCTATCTTAGGCCTCGAAGGGTTGATTGGTCCTCTCTTAGGATGAGACCACTTTCACATAACAATATCATCTCAACGTCTGATATGGGGTTGAAGAAAGAATTGAGAGAGATGCTGCCGATTATCGTATACAAGGAAAGCTTCTCGGTTAAAGATACGCAATGCTCAGTATGCCTTTTGGAATACCAAGCAGATGATAAGCTTCAACAGATACCTGCATGTGGCCATACATTTCACATGAGCTGCATTGATCTCTGGCTTGCCAATCACAGCACCTGCCCTCTCTGCCGCTTATCCCTCCTAACTTGTGCTACGTCTTCAACCGAGACATCTAACGTACAGAGGTCACAGAGCAATGAAGAAACACAAGTTACAGAGTTCTCAGAATCAAGATCTACTAGGCCTCTAGAAATTGCCGTCTCTGGAGAAGTTGCAACCAATGCTCACTGCATTGATGTTGAAGGACAGAATGCAGTAAACAATCAATAG 666 0.4084 MTSRGYYSSPITTSSNSSDCCSNRSDGSASASTELKIYRAFIFSVPIFFTFILLFLFYIFYLRPRRVDWSSLRMRPLSHNNIISTSDMGLKKELREMLPIIVYKESFSVKDTQCSVCLLEYQADDKLQQIPACGHTFHMSCIDLWLANHSTCPLCRLSLLTCATSSTETSNVQRSQSNEETQVTEFSESRSTRPLEIAVSGEVATNAHCIDVEGQNAVNNQ* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1244 221 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 181 - -
Lan8g1244 221 CDD RING-H2_EL5_like 113 156 - -
Lan8g1244 221 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Lan8g1244 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 162 IPR013083 -
Lan8g1244 221 SUPERFAMILY RING/U-box 98 161 - -
Lan8g1244 221 Pfam Ring finger domain 113 156 IPR001841 -
Lan8g1244 221 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 2 181 - -
Lan8g1244 221 MobiDBLite consensus disorder prediction 1 23 - -
Lan8g1244 221 SMART ring_2 114 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1244 Lan-Chr8 18675575 18678934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1244 28 160 C3H Transcription Factor Family AT4G10150 62.590 4.04e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1244 K19039 - gmx:100794211 259.225