Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1238 ATGGCTACCAACCAACTCATGATCATGCCTCTGTTACTACTGATCTTCCTACTACACATAGCCTCTGTGGCTTCATCATATCTCCAACGTGGGTTTTACTCAAACACATGTCCCGAAGCGGAATTCATAGTCCGAGATGTCATGAAGAAGGCCCTTATCAGAGAACCAAGAAGTGTTGCCTCTGTTATGCGCTTTCAGTTCCATGATTGCTTTGTCAATGGGTGTGATGCATCTATGTTGCTTGATGATACACCAACCATGCTTGGGGAGAAGCTGGCCCTCTCAAATATAAATTCGCTAAGATCATTTGAAGTTGTTGATGAAGTCAAGGAGGCCCTGGAGAAGGCTTGCCCTGGTGTTGTTTCTTGTGCTGATATCATAATCATGGCATCTAGAGATGCTGTTGCACTGACAGGAGGACCTTATTGGGAGGTGAGGTTAGGGAGATTGGACAGCTTGACTGCAAATCAAGAAGACTCAAACAACATCATGCCTAGCCCAAGAGCCAATGCAAGTGCTCTCATTGACCTCTTCCACAAATACAACCTTAGTGTTAAAGACCTTGTAGCACTCTCCGGATCTCATTCTATCGGCCAAGGTCGTTGTTTTTCCATCATATTTAGGCTATACAATCAATCCGGAACTGGAAAGCCTGACCCTGCCATTGATCCAGAGTATAGAAAAGTGCTAAACAAACTATGCCCACTAGATGGTGATCAAGAAGTGACAGGGAACCTTGATGCCACACCAGTAGTGTTTGATAACCAATATTTCAAGGACTTGGTTTCAGGAAGAGGGTTTCTCAATTCTGATCAAACTCTTTTCACTTTCCCTGAAACAAGGAAGTTTGTGAAGTTATATAGTAGACATCAAAATGAGTTTTTTGAAGCATTTGTGGAAGGAATGTTGAAAATGGGTGACTTGCAATCTGGTAGGCCTGGCGAGGTTCGGAGGAACTGCCGAGTGGTCAATGCTCGCCGGACTCATTTGCTGCTTGAATCTCCAAACATTATGGAGAATCAACATGTAGCAATAATATAA 1041 0.4352 MATNQLMIMPLLLLIFLLHIASVASSYLQRGFYSNTCPEAEFIVRDVMKKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSFEVVDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPYWEVRLGRLDSLTANQEDSNNIMPSPRANASALIDLFHKYNLSVKDLVALSGSHSIGQGRCFSIIFRLYNQSGTGKPDPAIDPEYRKVLNKLCPLDGDQEVTGNLDATPVVFDNQYFKDLVSGRGFLNSDQTLFTFPETRKFVKLYSRHQNEFFEAFVEGMLKMGDLQSGRPGEVRRNCRVVNARRTHLLLESPNIMENQHVAII* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1238 346 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 Gene3D Peroxidase, domain 2 165 305 - -
Lan8g1238 346 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PANTHER PEROXIDASE 17 12 326 - -
Lan8g1238 346 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Lan8g1238 346 PANTHER PEROXIDASE 72-RELATED 12 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 Gene3D - 31 324 - -
Lan8g1238 346 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Lan8g1238 346 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan8g1238 346 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1238 Lan-Chr8 18591492 18594726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1238 6 334 Peroxidase AT2G22420 74.164 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1238 K00430 - gmx:100796737 554.673