Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1218 ATGGGTCTGGGTTTGTTTAAGGCATTGTTTTGTTGCACCAAAACTCGTGAAATTCCGATTCTCACCTCGGATTCGTCTCCTCAGTATACCTACAAACAACCTAGGAAAAACCAACCAATTCCAACACCACCACCTCATCGTCCCAACAAACCTAGTCAATCTTCACAAATAGGACCAGTTTTAGGGAAACCTTACGTAAACATAAACATAATGTATGAAATGAAGAAAGAACTAGGAAGAGGCCAATCTGGTGTGACTTACCTTTGTGTAGAGAAGTCCACAGGAAGAGAATATGCATGCAAATCCATATCAAGGAGGAAACTTACATCGAAGCGAGAAATCGAGGATGTAAGAAGAGAGATTCTGATTCTGCAGCATCTTTCAGGGCAACCAAACATTGTCGAATTTCGGGGTGCTTACGAGGACCGACAGTACGTACACCTAGTGATGGAATTGTGCAGTGGTGGTGAGTTATTTGATCATATTATTCAAAAGGGGAACTACTCGGAACGTGAAGCTACTAAAATCATGAGGCAGATTATGAATGTGGTTCATGTGTGCCATTTCATGGGTGTGATGCATCGTGACCTTAAGCCAGAGAACTTCTTGTTGACTAGTAAAGATGGGAATGCTGCAGTTAAAGCTACTGATTTTGGACTCTCTATTTTCATTGAGGAAGGTGTAATGTATAAAGAAATTGTTGGAAGTGCATACTATGTGGCTCCAGAGGTGTTAAAACGGAATTATGGAAAGGAGATAGATGTTTGGAGTGCTGGAGTCATTCTATACATCCTCCTATGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGCATATTTGAAGCTATCTTGGAAGGTGAGTTGGATCTGGATAGTGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGAATTTTGACCCTAAGAAACGCATTACAGCTTCTGATGCCCTTGAACATCCATGGATGAAGGAAGGTGGTGCAGCATCTGATAAGCCTATTGACAGTGCAGTTTTAATTCGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATTGCAGAAAGCCTTACTGATGAAGAAATCAAGGGGTTGAAACAAATGTTCAAGAATATGGATACTGATCGCAGTGGCACAATCACATTTGAAGAACTAAAGTCTGGATTGTCTAGATTGGGATCCAAACTGAGTGAATATGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGACAACAATGGAACTATTGACTATGCTGAGTTCATCACTGCCACTATGCATCGTCATAAACTCGATAAGGAAGAGAGTTTGCGTAAAGCTTTTCAATATTTTGACAAGGATAACAGTGGTTATGTAACAAGAGATGAGCTTAGACAAGCTTTGACTGAATATAAAATGGGAGATGAAGCAACAATAGATGAAGTCATAGACGATGTTGACACTGACAAAGATGGGAAAATTAACTATGAGGAGTTTGTGACTATGATGAGACAGGGTACAGTGGATAATGATGACAAAGAGAAACCATGA 1569 0.4041 MGLGLFKALFCCTKTREIPILTSDSSPQYTYKQPRKNQPIPTPPPHRPNKPSQSSQIGPVLGKPYVNINIMYEMKKELGRGQSGVTYLCVEKSTGREYACKSISRRKLTSKREIEDVRREILILQHLSGQPNIVEFRGAYEDRQYVHLVMELCSGGELFDHIIQKGNYSEREATKIMRQIMNVVHVCHFMGVMHRDLKPENFLLTSKDGNAAVKATDFGLSIFIEEGVMYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLCGVPPFWAETEKGIFEAILEGELDLDSAPWPSISAAAKDLIRKMLNFDPKKRITASDALEHPWMKEGGAASDKPIDSAVLIRMKQFRAMNKMKKLALKVIAESLTDEEIKGLKQMFKNMDTDRSGTITFEELKSGLSRLGSKLSEYEIRQLMDAADVDNNGTIDYAEFITATMHRHKLDKEESLRKAFQYFDKDNSGYVTRDELRQALTEYKMGDEATIDEVIDDVDTDKDGKINYEEFVTMMRQGTVDNDDKEKP* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1218 522 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Lan8g1218 522 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Lan8g1218 522 SMART efh_1 449 477 IPR002048 GO:0005509
Lan8g1218 522 SMART efh_1 377 405 IPR002048 GO:0005509
Lan8g1218 522 SMART efh_1 413 441 IPR002048 GO:0005509
Lan8g1218 522 SMART efh_1 484 512 IPR002048 GO:0005509
Lan8g1218 522 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Lan8g1218 522 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1218 522 SUPERFAMILY Protein kinase-like (PK-like) 72 338 IPR011009 -
Lan8g1218 522 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Lan8g1218 522 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 37 515 - -
Lan8g1218 522 ProSiteProfiles EF-hand calcium-binding domain profile. 481 515 IPR002048 GO:0005509
Lan8g1218 522 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1218 522 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1218 522 CDD STKc_CAMK 72 329 - -
Lan8g1218 522 MobiDBLite consensus disorder prediction 23 60 - -
Lan8g1218 522 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Lan8g1218 522 Pfam EF-hand domain pair 378 438 IPR002048 GO:0005509
Lan8g1218 522 Pfam EF-hand domain pair 447 510 IPR002048 GO:0005509
Lan8g1218 522 SUPERFAMILY EF-hand 370 510 IPR011992 -
Lan8g1218 522 Gene3D Transferase(Phosphotransferase) domain 1 158 341 - -
Lan8g1218 522 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Lan8g1218 522 Gene3D - 342 516 - -
Lan8g1218 522 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Lan8g1218 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 515 - -
Lan8g1218 522 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Lan8g1218 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Lan8g1218 522 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1218 Lan-Chr8 18063900 18073461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1218 4 522 EF-hand Containing Proteins AT3G20410 63.178 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan8g1218 Pkinase 5.5e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1218 K13412 - gmx:100816157 814.298