Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1213 ATGGAACAGAAGCACGTTCTGTTATCAGCATTGAGTGTTGGGGTTGGGTTAGGTGTGGGTCTTGGATTGAGTTCAGGTCAAAAATGGGTTGGTGGGAATGGTGATTCTGATGAGATTTCTGAGGAGCAGATTGTGATGGAGCTCAAGAACCATGTGTTAGATGGGAAAGAAAGTGTAGTTACATTTAATGACTTTCCTTATTACTTAAGTGAAAGAACTCGAGTTTTGTTGTCAAGTGCTGGATATGTTCATTTGAAAAACCAACATTTTTCCAAGCACACACGGAACCTCTCACCAGCGAGCAGGGCTATTTTGCTCTCCGGTCCTACAGAACTTTACCAGCAAACGCTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTTGATAGATATTAGTGACTTCTCCTTAAAGATGCAAAGCAAATATGGATGTTCTAGAAAAGAACCATCTTTCAAAAGGTCCATATCGGAGGTGACTTTGGAGCGAATGTCTGGCTTGTTTGGTTCTTTTTCCATCCTCCCGGCAACAGGTGTAACTAGAGGGACTCTGTGGAAACATAGCAGCGCTGTTGAAAGTTCTAATAATCCTCACAAGCTTCGTAGAAATGCTTCTGCTGCATCTGATATAAGTAGCACTGCTTCCCAGTGTGGTCCAACAAATCCAGGTTACACTTTTCCTTTAAAGCGAACGAGCATCTTGTGTTTTGATGAAAAGCTCTTTGTGAAGTCACTTTACAAGGTTCTAGTTTCTATCTCAGAAACTGGTTCCATCATTTTATACATCAGGGATGTTGAGAAGCTCATTCTACAATCATCAAGGTTATACAATTTGTTACAAAAAATGATAAAGAAACTTTCAGGCTCGGTGTTGATACTCGGTTCCCAGATAATAGATTCAGATGATGATTGCAAAGAAATTGATGAAAGGCTCAGTATGCTATTCCCTTACAACATTGAGATCAATCCTCCTGAAGATGAAGCTCATCTTGGCATCTGGAAATCCCAACTAGAAAAGGACATGGAAGTTCTTCAATTTCAAGATAACCGAAACCACATTGCGGAAGTACTTGCAGCAAATGACATTCACTGTGATGACTTGACTTCAATATGCCATGCAGACACTATGATACTAAGTAGTTATATTGAAGAAATTGTGGTGTCTGCATTATCTTATCATGTGATGAATGGCAAGGATCCAGAATATAGAAATGGAAAGCTAGTTATATCAGCCAACAGTTTATCCCATGGATTGAGTCTTTTCCAGGAAGGCAAAAGTAGTGGGAATCTGAAGACCAATGAACCTATCAAGGACAATTCTGGCAATGATGTGCGGAGTGACAACCAATCACCTGAAAACAAAAATGAGACAGAGAAATCTGTCCCTGTGACGAAGAAAGATGCCGAGAATCCTGCTCCAGCAAAATTAGAAGTTCCTGACAACGAGTTTGAGAAACGCATACGACCAGAGGTTATCCCTGCAAGTGAGATAGGTGTTACATTTGCGGATATTGGAGCATTAGATGAGACTAAAGAATCACTTCAAGAGCTGGTCATGCTTCCCCTGAGAAGACCAGACCTCTTCAAAGGTGGGCTTCTAAAGCCATGCAGAGGTATATTGCTTTTCGGGCCTCCTGGTACTGGAAAAACAATGCTAGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATGTCCACCATCACTTCAAAATGGTTCGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTCACTCTAGCAGCAAAAGTTGCTCCAACTATCATCTTTGTTGACGAGGTTGACAGCATGCTTGGCCAGCGGACTAGAGTTGGAGAGCACGAGGCCATGCGGAAGATTAAAAATGAATTTATGACACATTGGGATGGGCTATTAACAAGACCTGGTGAGCAAATTCTGGTTCTTGCTGCAACCAATAGACCATTTGACCTTGATGAAGCAATTATAAGACGATTTGAGCGCAGGATTATGGTTGGTCTTCCATCTGCCGAGAACAGGGAAATGATCCTGAAAACTGTTCTAGCTAAAGAAAAACACGAAAACTTAGACTTCAAAGAACTCGGAACCATGACTGAAGGTTTTAGTGGAAGTGATCTTAAGAATTTGTGCATAACTGCGGCTTATCGACCTGTTCGGGAGCTAATACAGCAGGAGAGAAGGAAGGACATGGAAAAGAAGAAAAAAGCAGCAGAAGGCCAAGGCTCCGTAGATGCTTCGAACAACGAAGAAGACAAAGAAGAACGAGAAATTACACTTAGGCCTTTGAATATGGAAGACATGAGACAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCCTCGGAAGGAGCAGTAATGAGTGAGCTGAAGCAGTGGAATGATTTATATGGAGAAGGAGGTTCAAGGAAAAAACAACAGCTCACTTACTTCCTTTAG 2448 0.4171 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNGDSDEISEEQIVMELKNHVLDGKESVVTFNDFPYYLSERTRVLLSSAGYVHLKNQHFSKHTRNLSPASRAILLSGPTELYQQTLAKALAHCFESKLLLIDISDFSLKMQSKYGCSRKEPSFKRSISEVTLERMSGLFGSFSILPATGVTRGTLWKHSSAVESSNNPHKLRRNASAASDISSTASQCGPTNPGYTFPLKRTSILCFDEKLFVKSLYKVLVSISETGSIILYIRDVEKLILQSSRLYNLLQKMIKKLSGSVLILGSQIIDSDDDCKEIDERLSMLFPYNIEINPPEDEAHLGIWKSQLEKDMEVLQFQDNRNHIAEVLAANDIHCDDLTSICHADTMILSSYIEEIVVSALSYHVMNGKDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNEPIKDNSGNDVRSDNQSPENKNETEKSVPVTKKDAENPAPAKLEVPDNEFEKRIRPEVIPASEIGVTFADIGALDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTRPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREMILKTVLAKEKHENLDFKELGTMTEGFSGSDLKNLCITAAYRPVRELIQQERRKDMEKKKKAAEGQGSVDASNNEEDKEEREITLRPLNMEDMRQAKSQVAASFASEGAVMSELKQWNDLYGEGGSRKKQQLTYFL* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1213 815 CDD AAA 539 672 - -
Lan8g1213 815 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 815 - -
Lan8g1213 815 SMART AAA_5 537 674 IPR003593 -
Lan8g1213 815 Gene3D - 500 782 IPR027417 -
Lan8g1213 815 MobiDBLite consensus disorder prediction 451 483 - -
Lan8g1213 815 MobiDBLite consensus disorder prediction 426 450 - -
Lan8g1213 815 Pfam ATPase family associated with various cellular activities (AAA) 541 671 IPR003959 GO:0005524|GO:0016887
Lan8g1213 815 ProSitePatterns AAA-protein family signature. 644 663 IPR003960 GO:0005524|GO:0016887
Lan8g1213 815 MobiDBLite consensus disorder prediction 731 770 - -
Lan8g1213 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 359 IPR027417 -
Lan8g1213 815 Pfam AAA+ lid domain 693 737 IPR041569 -
Lan8g1213 815 MobiDBLite consensus disorder prediction 731 767 - -
Lan8g1213 815 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 815 - -
Lan8g1213 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 734 IPR027417 -
Lan8g1213 815 MobiDBLite consensus disorder prediction 426 483 - -
Lan8g1213 815 Gene3D - 673 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1213 Lan-Chr8 17930940 17938291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1213 501 730 Calmodulin-binding Proteins AT3G56690 39.316 4.32e-42 164