Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1211 ATGGAGAGAGTTCTGGATTTCGTTGAAGGCGTCGGAGAAAGCTCGTCGCCGCCGCGAAGCTTCAGCGGTTTTAGCAACTACGACGTGAGGAATGATGTGTACAATCGCTTAGTTGAAATCGGCCACGAACAAGCGGTGTCGAATCCCGATTTCAAGGAACAGTTGGAGGCTCACTTCAATCGCTTGCCTCCAAGTTATGGACTTGATGTCAATATTGATAGAGCTGAAGATGTTGTATTGCATCAACGTCTTCTTAATTTGGCTGAAGACCCAGAAAAGCGCCCTGTTTTCCATGTACGCTTCTTGGAGAATGTTTGTACTGGAACAGATGAAGATCAAGAAATAGTAAGCACTCATTCTAGCCCAAGGCCATCTGTTGATGCAATTAATGGGGGAGCTGTATCATGTCATAAGAGTAGGACAAGGGATCGTGCAACTGACTACGAGGCTTGCTCAAAGCTTGAGGGCCTAAACTTGGATGTTAGAAAGAACTCCAAGGAGATAGAGGAAAAATTCCTTACTGACAACTTTTCCCAGAGGCAGGAACAATCAAGTGTCCCACTTCATGAAGTAATATTTTCCACTGTTGACAAGCCAAAGCTTTTAAGCCAGCTTTCGGCTTTGCTGTCTGATATTGGACTTAACATCCGAGAAGCACATGTTTTTTCCACAACCGATGGGTACTCCCTTGATGTATTTGTGGTGGATGGATGGCCAGTAGAGGAAACAGATGTTTTGCATGACGCCATGGAAAAAGCCGTTGCGAGAAGTGAGGGGTCATGGTCCCGTTCTTCAAATTCTCACTTGGCTGTGGAAAAACCCATAGCATCAGAGGGAACATCTGGAGATTGGGAAATAGACAGGAGGTTATTGAAGATAGGAGAAAGAATAGCATCAGGTTCCTGTGGAGATCTGTATCATGGAGTTTATTTTGGTCAAGATGTTGCTGTTAAGGTTTTGAGATGTGAGCAATTGAATGATGCTTTGGAGGATGAGTTTGCTCAAGAAGTGGCAATTTTAAGGCAGGTGCATCATAAAAATGTTGTTCGCTTCATTGGGGCATGTACAAAGTCTCCACATTTGTGCATAGTGACAGAGTATATGACGGGAGGAAGTCTGTACGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCTGTTACTAAAGTTTGCAATTGATGTTTGCAAGGGTATGGAGTATTTGCATAGAAACAACATAATTCATAGGGATCTGAAGACAGCCAATTTGCTGATGGACGCACGCAATGTTGTTAAAGTAGCTGATTTTGGAGTTGCTCGGTTCCTAAATCAAGGGGGAGAGATGACAGCAGAAACTGGAACATATAGATGGATGGCGCCAGAGTATCTTACTGTTATCATATTTTCTCACAAGGTTATAAACCATCAGCCATATGACCAGAAAGCAGATGTGTTCAGTTTTTCCATAGTACTGTGGGAACTTGTGACAGCAAAGGTACCATATGATACCATGACTCCACTACAAGCTGCCTTGGGTGTGAGACAGGGTCTGCGTCCAGAACTTCCAAAGCACGGGCATCCTAAACTATTAGATTTGATGCAAAGATGCTGGGAAGGAGTTCCAAACAACCGGCCATCCTTCCATGAGATAACTGTTGAACTTGAGAATCTTCTGCAAGAAGTTGAGAGTGATTCAAATTCACAAGCTAACAGTGCTTGA 1704 0.4343 MERVLDFVEGVGESSSPPRSFSGFSNYDVRNDVYNRLVEIGHEQAVSNPDFKEQLEAHFNRLPPSYGLDVNIDRAEDVVLHQRLLNLAEDPEKRPVFHVRFLENVCTGTDEDQEIVSTHSSPRPSVDAINGGAVSCHKSRTRDRATDYEACSKLEGLNLDVRKNSKEIEEKFLTDNFSQRQEQSSVPLHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDVLHDAMEKAVARSEGSWSRSSNSHLAVEKPIASEGTSGDWEIDRRLLKIGERIASGSCGDLYHGVYFGQDVAVKVLRCEQLNDALEDEFAQEVAILRQVHHKNVVRFIGACTKSPHLCIVTEYMTGGSLYDYLHKNHNVLELSLLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDARNVVKVADFGVARFLNQGGEMTAETGTYRWMAPEYLTVIIFSHKVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLDLMQRCWEGVPNNRPSFHEITVELENLLQEVESDSNSQANSA* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1211 567 Gene3D Transferase(Phosphotransferase) domain 1 370 567 - -
Lan8g1211 567 SMART serkin_6 291 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1211 567 ProSiteProfiles ACT domain profile. 190 267 IPR002912 -
Lan8g1211 567 MobiDBLite consensus disorder prediction 1 22 - -
Lan8g1211 567 CDD STKc_MAP3K-like 297 549 - -
Lan8g1211 567 Gene3D Phosphorylase Kinase; domain 1 280 369 - -
Lan8g1211 567 Pfam Protein tyrosine and serine/threonine kinase 291 548 IPR001245 GO:0004672|GO:0006468
Lan8g1211 567 SUPERFAMILY Protein kinase-like (PK-like) 274 554 IPR011009 -
Lan8g1211 567 ProSiteProfiles Protein kinase domain profile. 291 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1211 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Lan8g1211 567 SUPERFAMILY ACT-like 189 257 IPR045865 -
Lan8g1211 567 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 560 - -
Lan8g1211 567 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 560 - -
Lan8g1211 567 PRINTS Tyrosine kinase catalytic domain signature 365 378 IPR001245 GO:0004672|GO:0006468
Lan8g1211 567 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672|GO:0006468
Lan8g1211 567 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Lan8g1211 567 PRINTS Tyrosine kinase catalytic domain signature 520 542 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1211 Lan-Chr8 17882175 17899854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1211 28 559 MAP Kinase Kinase Kinase AT4G35780 49.725 1.00e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan8g1211 PK_Tyr_Ser-Thr 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1211 - - gmx:100782737 925.235