Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1206 ATGCTGGGGGACTCAGCTGTGTTAGGAGCAGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTAGCTCTGGTGATGCAGTAGCTTCTGCATCAGCAGCAGCAGCAGCAGCAGTTCATGAAGGTGGTGGTGACACGGCGGTGGGTGGCGGTGGAGGATCAATTTCAGGAGATGAGGAAAGAGGTAGAGGAGAGGAAGGTGACCGGAGCTTTGGTGGAAACAGGTGGCCAAGGCAAGAGACTCTTGCTTTGTTGAAGATACGGTCAGATATGGATGTGGCGTTTAGAGATGCAAGTGTTAAGGGTCCCTTGTGGGAAGAAATCTCAAGGAAGCTTGCAGAACTTGGGTACCACAGAAATGCCAAGAAGTGTAAAGAGAAATTTGAAAATGTTTACAAGTACCACAAGAGAACAAAGGAAGGTAGAAGTGGAAAATCAGATGGCAAAACTTATAAGTTCTTTGATCAATTACAAGCACTTGAAGTAGTAAACCATCCTGCAATAACAATTCATCAATCTTCAACACCTTCAAAACCAACACAAACAACAGCACCATTGCAAGTAACACCAGTTTCAATAGTGGTAACAGCTGCATCATTGCCACATACAATTCCAACCACAACAACATTTCCAATGGTTCCATCTTCTAACTCCATTACTCCAAGTAGTGTTAATGTTCCTTTTTCACATGCTACACTCCCAATTTCAATGCCTCAACCCATTCTCAACACTACTACTATTGCTACTACCCCATCAATAAACCTCACTATCCCTTCTTTTCCACCACCAACAAACCCTACATATATTCCACCATCATCAACACCAAACCCTACAACAAAGCCTCCTCCTCATGTCACCAATATTAACCCAATTTCTTTTCCAAGCATACCAATGGATCTCTTGTCCAACTATAGTTCTTCCTCAACTTCCTCTGATGAAACATTGGAAGGAAGGCGCAAGAGGAAGAGAAAATGGAAAGACTTTTTTGAGAGACTAATGAAGGAGATGATCGAGAAGCAGGAGGAGCTCCAATGGAGATTTTTAGAAGCAATAGAGAAGCGAGAGCAAGAGAGATACTCTAGAGAAGAAGCGTGGAGGATGCAAGAGATGCAAAGGATCAATAGGGAAAGGGAAATTCTAGCACAAGAAAGATCCATGACTGCTTCAAAAGATGCAGCAGTCATGGCATTCTTGCAGAAACTAGCTGAACAACAAAATCTTGGCCAAGCATTTAATAACATCAACATTCCACAACAGCATGTGCCACCGGTGGCAACTGGATCGCTGCTGGTGCCAGCACCAGCACCAGCACCAATACAGGTGCAGCAGCAACAAATACTATTCCCACAGGCTGCATCCGTGCCTATGCCAGCAGTACAGGCACAGATGCAGCCGGCGGGAGCAGTGGTGTCAGTGGCACCACAACAGCAGCAACAAGTGAGCAATATGGAAATTGTAAAAGCTGATAATGGTGAGAATGTGACAGGAACAAGCTCTTCCAGGTGGCCAAAAGTGGAAGTTTTAGCACTGATAAGGCTGAGAACAAGCCTGGATGCTAAGTACCAAGAAAATGGACCAAAAGGGCCACTATGGGAAGAGATATCATCCTTGATGAAGAATAATGGGTACAACAGAAGTTCCAAAAGATGCAAAGAGAAGTGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAAGAAAGCAACAAGAAGAGGCCTGAAGATTCCAAAACTTGCCCATATTTTCACGAGCTAGATGCTCTATATAGAGAGAGGAACAAGCTACAAAACCCCATGAAGCACGAGAGCATGATGGCACCGCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAGCCGCCAACAGCACCACCGCCGAACGTGACCATGGAAGACGCACAGAATGACCCCATGGACCACCAGAACCATGAGGAGGAAGAGGAAGATGAGGATGACAAGGATATGGATGATGAAGATGAAGATGAAGATGAAGGAGGTGGTGATAACTATGAAATAGTGGCTAGCAAGCCATCTTCAGTGAGTGCATCTGCTGAATGA 2052 0.4547 MLGDSAVLGAGGGGGGGGGGSSGDAVASASAAAAAAVHEGGGDTAVGGGGGSISGDEERGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEISRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYKFFDQLQALEVVNHPAITIHQSSTPSKPTQTTAPLQVTPVSIVVTAASLPHTIPTTTTFPMVPSSNSITPSSVNVPFSHATLPISMPQPILNTTTIATTPSINLTIPSFPPPTNPTYIPPSSTPNPTTKPPPHVTNINPISFPSIPMDLLSNYSSSSTSSDETLEGRRKRKRKWKDFFERLMKEMIEKQEELQWRFLEAIEKREQERYSREEAWRMQEMQRINREREILAQERSMTASKDAAVMAFLQKLAEQQNLGQAFNNINIPQQHVPPVATGSLLVPAPAPAPIQVQQQQILFPQAASVPMPAVQAQMQPAGAVVSVAPQQQQQVSNMEIVKADNGENVTGTSSSRWPKVEVLALIRLRTSLDAKYQENGPKGPLWEEISSLMKNNGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHELDALYRERNKLQNPMKHESMMAPLMVQPEQQWPPQQPPTAPPPNVTMEDAQNDPMDHQNHEEEEEDEDDKDMDDEDEDEDEGGGDNYEIVASKPSSVSASAE* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1206 683 CDD GT1 72 137 - -
Lan8g1206 683 CDD GT1 498 563 - -
Lan8g1206 683 MobiDBLite consensus disorder prediction 258 289 - -
Lan8g1206 683 MobiDBLite consensus disorder prediction 258 286 - -
Lan8g1206 683 ProSiteProfiles Myb-like domain profile. 72 130 IPR001005 -
Lan8g1206 683 MobiDBLite consensus disorder prediction 640 666 - -
Lan8g1206 683 ProSiteProfiles Myb-like domain profile. 498 556 IPR001005 -
Lan8g1206 683 PANTHER - 28 677 - -
Lan8g1206 683 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 28 677 - -
Lan8g1206 683 MobiDBLite consensus disorder prediction 56 71 - -
Lan8g1206 683 MobiDBLite consensus disorder prediction 1 73 - -
Lan8g1206 683 Gene3D - 500 561 - -
Lan8g1206 683 Gene3D - 74 135 - -
Lan8g1206 683 MobiDBLite consensus disorder prediction 610 683 - -
Lan8g1206 683 Pfam Myb/SANT-like DNA-binding domain 498 585 IPR044822 -
Lan8g1206 683 Pfam Myb/SANT-like DNA-binding domain 72 158 IPR044822 -
Lan8g1206 683 SMART sant 496 558 IPR001005 -
Lan8g1206 683 SMART sant 70 132 IPR001005 -
Lan8g1206 683 MobiDBLite consensus disorder prediction 611 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1206 Lan-Chr8 17779334 17783028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1206 70 612 Trihelix Transcription Factor Family AT1G76890 44.405 4.46e-138 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g1206 Myb_DNA-bind_4 1.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1206 - - lang:109354958 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1009 7 10274467 10278041 Lan8g1206 8 17779334 17783028 LSH
Lan8g1206 8 17779334 17783028 Lan8g0764 8 9805310 9807922 PCT
Lan8g1206 8 17779334 17783028 Lan4g1824 4 26797561 26800383 PCT
Lan8g0764 8 9805310 9807922 Lan8g1206 8 17779334 17783028 PCT
Lan4g1824 4 26797561 26800383 Lan8g1206 8 17779334 17783028 PCT