Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1197 ATGGGCAATAACTGCGTGGGGCCAAACTCCCTTGGTGGGAATGGGTTCATGCAAAACGTCTCAGCGGCTCTTTGGCGAACCCGGCCACCGGAGGCCAGGCTTCCGCCACCGGACAACGCAGCAGCCACTGACAACAACAAGAACAAATGCACAGCATCGCCACCCCATGATTCCTCAAACGATTCAAGTATCAACGAAGATTCCGACAATTCAAAAGGCCATAATGATCCTCCCATGCCGGTTCAGAGCACACCGCCTGAACCGGTCAAAATAGCCGCAGCGGGGGAGACAAAACCGGTGTCAGTTCAACCCGAAAAGCCAGTTAACCTAGTAATAAATAATGAACTGGCACCGGTTAATATCGGTGCTGGCCCCGGTGGGGCTGGTGGTGGTGGTAATAACGGTGATGGTAAAGCTAAAAAACCTACTCATGTTAAGAGGGTTTCAAGTATAGGGCTTCAAGTAGAGTCAGTATTGGGTAGAAAAACTGGGAACTTAAAAGATGTTTATAGCTTAGGTAAGAAGTTAGGGCAAGGTCAATTTGGCACAACATATTTTTGTGTTGAAAAAGGAACTAATAAAGAGTTTGCATGCAAATCAATTCCTAAAAGAAAATTAACAACACAAGAAGATGTTGAAGATGTTAGAAGGGAGATTCAGATAATGCACCACATGGCTGGCCATCCAAATGTAATACAAATAATTGATGCTTATGAAGACGTTGTGGCTGTTCATGTTGTAATGGAACTATGTGCTGGTGGAGAACTCTTTGATAGGATCATACAAAGAGGACATTATACTGAGAAAAAAGCTGCTGAACTTGCTAGGTTGATTGTTAGTGTTGTTGAGGCTTGTCATTCTTTAGGTGTTATGCATAGGGATTTGAAGCCAGAGAATTTCCTCTTCATCAATCATGAAGAAGAATCGCCTCTTAAGACGATCGATTTCGGTCTTTCGGTGTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTTGCCCCTGAAGTTTTGAGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGTGCTGGAGTTATCATTTATATTTTACTCAGTGGTGTTCCTCCATTTTGGGATGAAACCGAACAAGGAATATTTGAGCAAGTTTTGAAAGGAGATCTTGACTTTGTTTCTGAACCATGGCCTCACATTTCTGATAGTGGAAAGGATCTTGTGCGCCGAATGCTTATAAGGGACCCGAAGAAGCGGATGACCGCACACGAAGTTCTTTGCCACCCCTGGGTTAAGATTGGAGGTGCTGCTCCGGATAAACCACTTGATTCTGCTGTCTTATCTCGTTTGAAGCAATTCTCTGCAATGAATAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTCTTTCTGAAGAGGAAATTGGAGGACTAAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACAAATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTAGGCTCCATTCTTAAGGATTCAGAAATCGATTGGTTAATGCAAGCAGCAGATGTGGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGATTCATCTAAACAAGGTCCAGAAGGAGGATCATTTATTTGCAGCCTTCTCCTATTTTGACAAAGACGGGAGTGGATACATCACAAAGGATGAGCTTCAACAAGCATGTGAACAGTTTGGCCTAAAAGATGATCACTTAGATGATATAATACCTGAAGTTGACCAAGATAATGATGGACGCATTGATTACAGTGAGTTTGCTGCAATGATGCAAGACACTGGTTTTCGCAAACTACAAATAGCTTGA 1854 0.425 MGNNCVGPNSLGGNGFMQNVSAALWRTRPPEARLPPPDNAAATDNNKNKCTASPPHDSSNDSSINEDSDNSKGHNDPPMPVQSTPPEPVKIAAAGETKPVSVQPEKPVNLVINNELAPVNIGAGPGGAGGGGNNGDGKAKKPTHVKRVSSIGLQVESVLGRKTGNLKDVYSLGKKLGQGQFGTTYFCVEKGTNKEFACKSIPKRKLTTQEDVEDVRREIQIMHHMAGHPNVIQIIDAYEDVVAVHVVMELCAGGELFDRIIQRGHYTEKKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGDLDFVSEPWPHISDSGKDLVRRMLIRDPKKRMTAHEVLCHPWVKIGGAAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIGGLKEMFKMIDTDNSGQITLEELKNGLERVGSILKDSEIDWLMQAADVDNSGTIDYGEFIAAMIHLNKVQKEDHLFAAFSYFDKDGSGYITKDELQQACEQFGLKDDHLDDIIPEVDQDNDGRIDYSEFAAMMQDTGFRKLQIA* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1197 617 ProSiteProfiles EF-hand calcium-binding domain profile. 543 578 IPR002048 GO:0005509
Lan8g1197 617 Gene3D - 454 606 - -
Lan8g1197 617 SUPERFAMILY EF-hand 468 607 IPR011992 -
Lan8g1197 617 MobiDBLite consensus disorder prediction 22 87 - -
Lan8g1197 617 MobiDBLite consensus disorder prediction 41 66 - -
Lan8g1197 617 CDD STKc_CAMK 169 427 - -
Lan8g1197 617 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Lan8g1197 617 SUPERFAMILY Protein kinase-like (PK-like) 170 429 IPR011009 -
Lan8g1197 617 ProSiteProfiles EF-hand calcium-binding domain profile. 507 542 IPR002048 GO:0005509
Lan8g1197 617 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Lan8g1197 617 ProSiteProfiles Protein kinase domain profile. 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1197 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Lan8g1197 617 Gene3D Transferase(Phosphotransferase) domain 1 256 432 - -
Lan8g1197 617 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Lan8g1197 617 ProSitePatterns Protein kinases ATP-binding region signature. 176 199 IPR017441 GO:0005524
Lan8g1197 617 MobiDBLite consensus disorder prediction 123 147 - -
Lan8g1197 617 Pfam Protein kinase domain 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1197 617 SMART serkin_6 170 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1197 617 ProSiteProfiles EF-hand calcium-binding domain profile. 579 612 IPR002048 GO:0005509
Lan8g1197 617 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 109 610 - -
Lan8g1197 617 CDD EFh 547 607 IPR002048 GO:0005509
Lan8g1197 617 ProSitePatterns EF-hand calcium-binding domain. 590 602 IPR018247 -
Lan8g1197 617 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Lan8g1197 617 Gene3D - 444 537 - -
Lan8g1197 617 Gene3D Phosphorylase Kinase; domain 1 172 255 - -
Lan8g1197 617 Pfam EF-hand domain pair 476 536 IPR002048 GO:0005509
Lan8g1197 617 Pfam EF-hand domain pair 546 607 IPR002048 GO:0005509
Lan8g1197 617 PANTHER SERINE/THREONINE-PROTEIN KINASE 109 610 - -
Lan8g1197 617 SMART efh_1 547 575 IPR002048 GO:0005509
Lan8g1197 617 SMART efh_1 511 539 IPR002048 GO:0005509
Lan8g1197 617 SMART efh_1 581 609 IPR002048 GO:0005509
Lan8g1197 617 SMART efh_1 475 503 IPR002048 GO:0005509
Lan8g1197 617 CDD EFh 476 536 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1197 Lan-Chr8 17584642 17592338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1197 1 614 EF-hand Containing Proteins AT2G38910 71.036 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan8g1197 Pkinase 2.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1197 K13412 - gmx:100813232 969.533