Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1182 ATGGGAATGGATTACTACAACATACTGAAAGTAAATCGAAACGCTAGCGATGAAGCATTGAAAAAAGCGTATAAGAGGCTTGCAATGATTTGGCACCCCGACAAAAATCTCGTTAACAAAAGCGAAGCCGAAGCCAAATTCAAACGAATCTCCGAAGCCTATGATGTTTTAAGCGATCCTCAAAAGCGTCAGATCTATGATCTTTACGGCGAGGAAGCGCTGAAGTCTGGACAGTTCCCGCCGCCGTCACAATCATCGTCATCGTCATCTTCACGCGCTCACCAGCAGCGTCATAATCCCAACGCCACCTCGTTCCAGTTCAATCCCCGTGACGCTGATGACATTTACGCCGAGTTTTTTGGCAGCGATGGGGCTGACAGTGGAGGAGGAAGTGGTGGGAGAGGTGGAGGGCGTAGGGATGGATTCTTTCGGACTTCGTCCAATGCTTCGCCGTTCGGGGGAGTGGGAAGGAAGGCTGCTGCTGTGGAGAATGCATTGCCGTGTAACTTGGAAGATCTCTATAAGGGTGTCAAGAAAAAGATGAAGATCTCGAGGAAGGTTTATGATGCGTTTGGAAAGTGTCATAACGTGGAGGAGATTTTGACTATTGAGATAAAACCTGGCTGGAAGAAAGGAACAAAGATTACTTTCCCCGAGAAGGGTAACCAGGAGCCTGGCGTCATCGCTGCAGATCTTATATTTGTGATAGATGAGAAACCACATGCTCTTTACAGAAGGGATGGTAATGATTTGACGATGAATCAGGAGATAACTCTTCTGGAGGCCCTTACAGGTAAAACCTTGGAGCTCACCACCTTGGATGGAAGAAGTCTCGTGATCCCGCTGACAGATATCGTCAAACCTGGTGCTGAGATTGTTGTCCCTAACGAAGGAATGCCGATATCGAAAGAGCCTGGGAAGAAGGGGAATTTAAGAATTAAGTTGGACGTCAAGTACCCCTCAAGGCTAACTGCAGAGCAGAAATCTGATCTAAGGAGAGTATTAGGTGGAATCTCATAA 1020 0.4716 MGMDYYNILKVNRNASDEALKKAYKRLAMIWHPDKNLVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPSQSSSSSSSRAHQQRHNPNATSFQFNPRDADDIYAEFFGSDGADSGGGSGGRGGGRRDGFFRTSSNASPFGGVGRKAAAVENALPCNLEDLYKGVKKKMKISRKVYDAFGKCHNVEEILTIEIKPGWKKGTKITFPEKGNQEPGVIAADLIFVIDEKPHALYRRDGNDLTMNQEITLLEALTGKTLELTTLDGRSLVIPLTDIVKPGAEIVVPNEGMPISKEPGKKGNLRIKLDVKYPSRLTAEQKSDLRRVLGGIS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1182 339 Pfam DnaJ C terminal domain 163 320 IPR002939 -
Lan8g1182 339 SMART dnaj_3 3 62 IPR001623 -
Lan8g1182 339 CDD DnaJ 4 59 IPR001623 -
Lan8g1182 339 Pfam DnaJ domain 4 67 IPR001623 -
Lan8g1182 339 Gene3D DnaJ domain 2 131 IPR036869 -
Lan8g1182 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 244 329 IPR008971 GO:0006457|GO:0051082
Lan8g1182 339 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Lan8g1182 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lan8g1182 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lan8g1182 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lan8g1182 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lan8g1182 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lan8g1182 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 241 IPR008971 GO:0006457|GO:0051082
Lan8g1182 339 MobiDBLite consensus disorder prediction 78 108 - -
Lan8g1182 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lan8g1182 339 PANTHER BNAA06G20720D PROTEIN 2 338 - -
Lan8g1182 339 CDD DnaJ_C 166 323 - -
Lan8g1182 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 338 - -
Lan8g1182 339 MobiDBLite consensus disorder prediction 123 147 - -
Lan8g1182 339 MobiDBLite consensus disorder prediction 74 108 - -
Lan8g1182 339 Gene3D - 160 239 - -
Lan8g1182 339 Gene3D - 241 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1182 Lan-Chr8 16801891 16807357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1182 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 2.43e-09 56.6