Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1176 ATGGACATGGAAGATCATCATAACTATAATCATCACTACCATAACTATGACCATGAAGAAAAGTACGGCATAACCGATCTCAGGCAGCTTATAAGTGAACCAAGGTCAGCCACCCATTTCACTTCTACACCGTTACCACCCCAACCCACGGCTGAGCTTTTCCCCAGCCACCACCGGAATCTGACACCTCTCCACCAACAACACTACGAGATGATGATGTTTGGTCGTGACATCATGCCATGTACAACCACTCTTCACGACTTTCCTTCCACCACCGATTCTGTTGCTCCAGCAGGAAGCATCACTGTAGGTTATGTAGCCACAACCACTGCTGCCGCTGGTGCTGCCACAGCTAGTGCTTCGACTCCTCCTCTTAGCGGTGGCTTAGAGGCTGAGACCGCATGCTGCATCGGTGGAGATGCATCCACTGGAAGATGGCCCAGACAAGAAACCCTCACTCTTCTTGAAATTAGATCTCGGCTTGACCCTAAGTTCAAAGAGGCTAATCAAAAAGGACCCGTGTGGGATGAAGTGTCTAGGATCATGTCTGAAGAGCATGGATATCAAAGGAGCGGAAAAAAGTGCAGGGAGAAGTTTGAAAATCTCTACAAATATTACAAGAAGACAAAAGAAGGTAAAGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAGCATTAACCACTCATCAGTTCCAGAAACCAACTTTTGTAGCAACATTCGTTTAAAGACAAGCAACATTAACACCCCTTATGAAGCAAATCATGAAAATTGTTGCCTCAGCTTCAATAACTCCACTGACTTTGACACATCCTCATCTGATGATGATGATGACAATGATCATAATAACAGCATTGAGGGGCTTATGGAGATTAATAATGAGTCAATGTTGGAGAAGAGGAGGAATAAGAGGAAGAGTGGAAGGAGCTGGAAGGTGAAGATAGAAGACTTGATTGACTCACAAATGAGGAAGCTGATGGAGAAGCAAGAGGAATGGTTGAATAAACTTATGGAAACAATGGAACAGAAGGAAAAGGAAAGGGTGTTGAGAGAGGAAGAATGGAGGAAACAAGAGGTTAATAGGTTAGAGAGGGAGCACAAGTTTTGGGCTAAAGAGAGAGTATGGACTGAAGCAAGGGATGTTGCTTTAATTGAATCTTTGCAACAGCTAACAGGAAGAGAAATAAAGGGTAGTGAAGCTAATGAGCGTGTTGAAGTTGCAGCTGAGATGAGAAACAACAGTGGAAACCAGAATGAAGATGTAATTGAAATTTTGAATAGCACTGTAGAAGTTGATGATAGCTGGAAAGAACCTGAGATTACAAGGTTGCAACAGTTGAGAGATGAGATGGAAACATGGGAGGAAATAGCAAACAAAATGACTTGTTTTGGATATGAAAGGACTGCTTTTATGTGCAAAGAGAAATGGGAGAGTATCAGCAGAAACTACTATGCCAAGGAAAGAAACAAGAAGAAGAAGGAATATTCAAGATGTTCTTTTTACCTTGAGAACAATGACCAATCTTCATTATACAAGGAAGGAAGTACTTATTGTGATATCAATGATCATCAAAGGCCTCAAACAAATGATGGTTCTTCACCTTCAATTACCAATGTTGGTCATGCTGACACTTGCTTTCCCTTCTTGATGAGTGAGGGTGTAAATTTGTGGGAGAATTATGGGTTAAAGCTCAATAAAAACAACCAAAACCATTGA 1746 0.4181 MDMEDHHNYNHHYHNYDHEEKYGITDLRQLISEPRSATHFTSTPLPPQPTAELFPSHHRNLTPLHQQHYEMMMFGRDIMPCTTTLHDFPSTTDSVAPAGSITVGYVATTTAAAGAATASASTPPLSGGLEAETACCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPVWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGESINHSSVPETNFCSNIRLKTSNINTPYEANHENCCLSFNNSTDFDTSSSDDDDDNDHNNSIEGLMEINNESMLEKRRNKRKSGRSWKVKIEDLIDSQMRKLMEKQEEWLNKLMETMEQKEKERVLREEEWRKQEVNRLEREHKFWAKERVWTEARDVALIESLQQLTGREIKGSEANERVEVAAEMRNNSGNQNEDVIEILNSTVEVDDSWKEPEITRLQQLRDEMETWEEIANKMTCFGYERTAFMCKEKWESISRNYYAKERNKKKKEYSRCSFYLENNDQSSLYKEGSTYCDINDHQRPQTNDGSSPSITNVGHADTCFPFLMSEGVNLWENYGLKLNKNNQNH* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1176 581 Gene3D - 146 208 - -
Lan8g1176 581 Gene3D - 360 496 - -
Lan8g1176 581 MobiDBLite consensus disorder prediction 279 314 - -
Lan8g1176 581 Coils Coil 321 363 - -
Lan8g1176 581 PANTHER - 42 572 - -
Lan8g1176 581 ProSiteProfiles Myb-like domain profile. 138 203 IPR001005 -
Lan8g1176 581 ProSiteProfiles Myb-like domain profile. 444 490 IPR001005 -
Lan8g1176 581 SMART sant 142 205 IPR001005 -
Lan8g1176 581 SMART sant 360 492 IPR001005 -
Lan8g1176 581 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 42 572 - -
Lan8g1176 581 CDD GT1 145 210 - -
Lan8g1176 581 Pfam Myb/SANT-like DNA-binding domain 145 231 IPR044822 -
Lan8g1176 581 Pfam Myb/SANT-like DNA-binding domain 445 513 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1176 Lan-Chr8 16566263 16570254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1176 68 576 Trihelix Transcription Factor Family AT5G03680 43.369 6.23e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan8g1176 Myb_DNA-bind_4 1.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1176 - - lang:109335088 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1176 8 16566263 16570254 Lan20g1148 20 15627825 15631340 LSH
Lan19g0402 19 5211012 5217094 Lan8g1176 8 16566263 16570254 PCT
Lan8g1176 8 16566263 16570254 Lan19g0402 19 5211012 5217094 PCT