Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1173 ATGGGTTCATTCTCTGGCGCATGTGAAATAGTTGAAGCAAATGAAGATCTAAACATAGGAAAGGCTGCAGGGGTTTACTGGCCTAATTCTGGATATAGCACGACTGAGAAAAATCAGAAGCTTCCTGTGCTGAGTCTGGGATGCAAGGATAATCCAGATAATGATATCAATAAGCTGTTTGAATCATTTACTCTTAAATCTTCTTCAAGAGATTTGGGAATTCTACATGATGGTACGAGCCCTAAGATGAAAAGTGCATTAAAAAAACCAATCACAATTGGTGTCCCTCGGTCCCCACGAGTTGGGACTTCTGAGCCTGTGACTTTGAAGCAGGCATTAAGAGACATGTGTATATCTAAGGCATCAGAAGTGGCTGCTATGAAAAGATTATCGAAGTCAACAGCTGCTTCCCCAAGAATATCAGAGGTTGGGAAAATACAGACATTGTACAATTCAGTTGTAGTTGAAGGTAGGCGATCTGGGCCGTCTAACCTTGGGGTTAAAGTGAGTACAATTGCAATTTCTCTAGTGCCAGAAGAAAGCAAGTCACTTTCCTCAGCAAAAATATCCCAATCTCATCAAACTGCCAGCAGTACATCTTTGGGCGAAAATGGCCATTCTTCCAAAATTAATTTTTCACTTACAGAAAGTGATGCTGGTGCGTCATTGATGCAAAGTGATTTGGTATATTCATCAAGTAAAGTTGGGAATCAATCACAGTCATTTGGGCCTGCTCAAATAGAAAAACAAACATCTGCATCTTGTCCATCTATGTGTAACACTAAAGGAAGTAAACTAGAGTTGCGTGAATATGTTTCTTCCCCTAAAGAATTAGGAAATAATTCACCTATCTCAAAAAATGGGTTGAAAGGTAGATTACAAACAGTATCTTCCTCATCTACTTCACTTAATGCCAATAGAGTGGGCAAACTATCACGTCCCAGTACAGTCAAATCAATTATCAAAAACAAGAATTTGAATAAGAAGAAACTAAAGCAAGGTTCAGGTTCAGGTTCTGCGTTATATGATCCTACATCAGATGAAGTAAATAAAAAATCAACACCTGGTACATCGCAACTGGTTTGTGAGAGATGTTTGTGTGCTATAGAAAATACAAGTAAAGAAAACAACGAAGGTGTTATATTATTGGGATCTACCAGTCCTGGAAATGGAGTGAACTTGAGTATGCACTCCGACTTAGCATCAACTGGCTGTAATAACGGCACAGAAGTTGCAAAAGGAAAAAAAAATACCGGGTCGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGACTACAGTACTAGTACAAGTACCAGTGATGATAGCAATGTTAGTGGTTCTATTTCTGGCAATAGGCCCCACATGTCAAAGGATGTTAGGTGGGAAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTCTGAAGAAACTTGGTTGTGGAGACATTGGGACTGTGTATCTGGCAGAACTAATTGGCACCAATTGCTTGTTTGCTATTAAGGTAATGGACAACGACTTTTTGGCTAGAAGAAAGAAGATGCGTCGGGCTCAAACTGAAAGAGAAATATTAAGGATACTGGATCATCCTTTTCTTCCTACAATGTATGTGCAGTTCACATCAGATAATCTTTCTTGTCTGGTCATGGAGTATTGTCCAGGAGGAGATCTTCATGTTCTACGGCAGAAACAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTTGCTGAAGTCCTTCTCGCTTTGGAGTATTTGCACATGCTTGGAGTTGTTTACCGCGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGATGGCCATATTATGCTCACAGATTTTGACCTGTCACTAAGGTGTGATGTTAATCCAACACTTCTGAAATCATCTGATATAGATCCTGCTAAGATTTCTGGTCAATGTGTACAATCGAGTTGCATCGAACCATTCTGCATTGAACCAGCTTGTCAAGTTGCATGCTTCAGCCCTAGATTATTACCTCCTGCTGCTAGAGCCAGGAAATTAAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAGCTTGTGGCTGAGCCGACCGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCGCCGGAGATCATCAAAGGAGAAGGACATGGTGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCCAATAATGAAGAAACATTAGCCAACGTCGTGCTGAAGAGTCTCAGATTCCCTGACACCCCATTTATAAGTTTCCATGCAAGGGATCTCATAAGAGGGTTGTTGGTTAAAGAGCCGGAAAACCGTTTAGGTTCAGAGAAAGGTGCTGCTGAGATTAAACAGCACCCATTCTTCGAGGGTCTAAATTGGGCCTTAATACGTTGTGCTATCCCACCAGAAATTCCAGACTTTTGCGAGTTTGGAGTTTCCGACATGACCTTACAGTCACCACATGGCAATGGTGATAAGTATTTAGAGTGTAGAGGAGGAGAACAAGTGGAATTTGAGTTGTTCTAA 2607 0.4074 MGSFSGACEIVEANEDLNIGKAAGVYWPNSGYSTTEKNQKLPVLSLGCKDNPDNDINKLFESFTLKSSSRDLGILHDGTSPKMKSALKKPITIGVPRSPRVGTSEPVTLKQALRDMCISKASEVAAMKRLSKSTAASPRISEVGKIQTLYNSVVVEGRRSGPSNLGVKVSTIAISLVPEESKSLSSAKISQSHQTASSTSLGENGHSSKINFSLTESDAGASLMQSDLVYSSSKVGNQSQSFGPAQIEKQTSASCPSMCNTKGSKLELREYVSSPKELGNNSPISKNGLKGRLQTVSSSSTSLNANRVGKLSRPSTVKSIIKNKNLNKKKLKQGSGSGSALYDPTSDEVNKKSTPGTSQLVCERCLCAIENTSKENNEGVILLGSTSPGNGVNLSMHSDLASTGCNNGTEVAKGKKNTGSKEQLEFSQSSKSSQGDYSTSTSTSDDSNVSGSISGNRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNDFLARRKKMRRAQTEREILRILDHPFLPTMYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVNPTLLKSSDIDPAKISGQCVQSSCIEPFCIEPACQVACFSPRLLPPAARARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLKSLRFPDTPFISFHARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPEIPDFCEFGVSDMTLQSPHGNGDKYLECRGGEQVEFELF* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1173 868 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 868 - -
Lan8g1173 868 Gene3D Transferase(Phosphotransferase) domain 1 564 632 - -
Lan8g1173 868 Gene3D Phosphorylase Kinase; domain 1 482 563 - -
Lan8g1173 868 SUPERFAMILY Protein kinase-like (PK-like) 461 839 IPR011009 -
Lan8g1173 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Lan8g1173 868 MobiDBLite consensus disorder prediction 296 355 - -
Lan8g1173 868 PANTHER FLIPPASE KINASE 1-RELATED 1 868 - -
Lan8g1173 868 MobiDBLite consensus disorder prediction 421 457 - -
Lan8g1173 868 Gene3D Transferase(Phosphotransferase) domain 1 708 832 - -
Lan8g1173 868 ProSiteProfiles Protein kinase domain profile. 484 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1173 868 MobiDBLite consensus disorder prediction 296 322 - -
Lan8g1173 868 SMART serkin_6 484 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1173 868 MobiDBLite consensus disorder prediction 184 206 - -
Lan8g1173 868 MobiDBLite consensus disorder prediction 330 355 - -
Lan8g1173 868 MobiDBLite consensus disorder prediction 405 459 - -
Lan8g1173 868 CDD STKc_phototropin_like 482 833 - -
Lan8g1173 868 Pfam Protein kinase domain 485 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1173 868 Pfam Protein kinase domain 712 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1173 Lan-Chr8 16318242 16323797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1173 1 868 AGC Kinase Gene Family AT3G52890 52.830 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan8g1173 Pkinase 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1173 - K08286 gmx:100813470 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1173 8 16318242 16323797 Lan20g1156 20 15788972 15793325 LSH
Lan9g0452 9 6778358 6780124 Lan8g1173 8 16318242 16323797 PCT
Lan5g1204 5 25976331 25978060 Lan8g1173 8 16318242 16323797 PCT
Lan5g0283 5 3961911 3968261 Lan8g1173 8 16318242 16323797 PCT
Lan8g1173 8 16318242 16323797 Lan5g0283 5 3961911 3968261 PCT