Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1167 ATGCTAGACTCCGTTCTTCTAGCTCTTTTCCTCCCTTGTATCGGAATAAGCGCTGTCTTCATAGTCTACATGTGCCTTCTATGGTACGTCACCACTCACCACCCCGCTCATACCAGTCAACCGGCCAAGCCGGTAACGGAGATAGGTCTCTCCGCTTCGGAGCTTGAGAAACTTCCGAGGATCACAGGTAAAGATCTTATCATGGGGTCTGAATGTGCTGTGTGTCTCGATGAGATCGAAAATGAGCAACCGGCTCGGCTTGTTCCAGGTTGCAACCATGGGTTCCATCTTGAATGCGCTGATACGTGGCTTTCTAAGCACCCTGTGTGCCCCATTTGTAGAACTAAACTTGACCCTCAGATTTTTGATTCACCTGAAAATGAAAATCCATGTTGA 396 0.4823 MLDSVLLALFLPCIGISAVFIVYMCLLWYVTTHHPAHTSQPAKPVTEIGLSASELEKLPRITGKDLIMGSECAVCLDEIENEQPARLVPGCNHGFHLECADTWLSKHPVCPICRTKLDPQIFDSPENENPC* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1167 131 SUPERFAMILY RING/U-box 60 121 - -
Lan8g1167 131 ProSiteProfiles Zinc finger RING-type profile. 72 114 IPR001841 -
Lan8g1167 131 SMART ring_2 72 113 IPR001841 -
Lan8g1167 131 Pfam Ring finger domain 71 114 IPR001841 -
Lan8g1167 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 120 IPR013083 -
Lan8g1167 131 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 131 - -
Lan8g1167 131 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1167 Lan-Chr8 15753738 15754348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1167 1 131 C3H Transcription Factor Family AT5G42200 51.471 1.17e-46 146