Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1150 ATGGAATGCAATAAGGATGAGGCCATCAGAGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATACTTTGGGTGCAAAGAAGTTTGCATTGAAGGCCCAAAATTTATTTCCTGCTCTTGAGGGTATTCCTCAAATGTTAGCAACACTCAATGTGCATATTTCTGCTGAGAATAAAATAAATGGAGAAGTAGATTGGTATGGTATTCTTGGTGCAAATCCCCTTGCTGATGAGGATACAGTCAGGAAACATTACAGGAAGCTAGCTCTCATGCTTCACCCCGACAAGAACAAGTCTGTTGGAGCTGACGGGGCTTTTAAACTTATTTCGGAGGCATGGAGTATACTATCAGATAAAGCTAAAAGGACAGCATATGATGAGAAGAGAAATGCAAAAGCTGGGAAAGTTTCAACTAAGTTTGGAGGTTCATCAGCGCGAACAGGTGTTAATGGCATTTACAATTTTACTAAAACTACCTCTTCAAGTGCAAGGACTCAGAAAAGTACTGCTAAAGATTCTCATAAGAGTGCTTCTAAAGACTCTCAGAAGAATATTGCTAAAGAACACACTCCATCTTCTACTAATAAGTCCAAAACAAATACTTTCTGGACTGTTTGCCATCGATGCAAAATGCAGTATGAGTATCTTACAATTTATCTTAATCTTAAACTTTTGTGTCCCAACTGCAATGAGCCATTTTATGCTGTAGAAACTGCTCCTCCACCTTCAACTTCATGGACCTTTTCACAGCATCAACAAAGTTCTGGCCGCCAAGTACCTAACAAAAATAAGTCCAATGCCGGAAAGAACAAAATGTCACCTCCAAATGTTGGAGCTGGGGGTTATTGTAAAAATGACTCTAATAACCATACCAACTTCCAGTGGACTCCATTCTCGAAAACTTCTGGTGTCTCTAACGTAGCTCAAGCTGCTAATGTGGTTCAGCAGGCATATGATAAAGTGAAGCGAGAACGTGTGGAAGCACAAGCAGCTATGAAAAGGGTAGAGGCCTTGAAAAGGAAGCAGCATGCTTTTAAAAAAGGTTACTTTAGTCCTGCTAAGAGAAGAAAGGGGGGCGTGGAGGATGCTAGTATGAGTAACCATGCTACGGAGCATGTAAATCAAATAGGAGTTGCAAACAGTGGAGCAGGACTATATAGCGTGCGCAGGGTTGAAAATGCTGGTGTGGGATTTCCTAGGGATATTCTTATGACGAAAGCTAGGAAAGAAATTAACAAGAAACTCGGGAACATTCAGTCAAATACTGTTGATAAAACTGTGGTGAAGGAGAGTGAAGATGGCATCCCGAAGATAAATGAAGAAGGAGAAAAGTCTGTTAGAAACGCTGAGACATGCACTCAAACTAACATTCAGAAGTCGGAAAATAAGAAGAGTGGATCTGAAGATGTTAAGTCATTTGTAGTTAATACTACTGCCAAAATTGGTACAAAAGTTTTGGAGACTATACCAGTAGATGTCCCAGATCCTGAGTTCCATGATTTTAACAAGGATCGGACTGAGATATGTTTCGGTGAAAATCAAGTATGGTCCGTATATAATGATAATGATGGGATGCCTCGATATTATGCAATGATCCACAACGTGATCTCTCTGAATCCATTCAAGATGCAGATCAGGTGGCTCAACTCGAAGACCAACAGTGAACTGGGCCCCCTAAACTGGGTTGTTTCAGGCTTTTTAAAAACTTGTGGGGATTTCAGAACAGGCAAACTTGAAATATGTGATTCCATCAATATTTTTTCTCACAGGGTGGGGTGGAGAAAAGGCGATCATGGAGCCGTTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCCTCTATAGGAATTGGTCTATTTATTGGAATGAGCTAACAGCAGATGAGGATATACACAAGTATGATATGATTGAAGTACTTGAGGATTTTACTGAAGAGCAGGGTGTAATTGTTATTCCTCTGGTCAAAGTGGCTGGGTTCAAGACAGTATTTCATCACCACTTAGATCCAAGAGAAATAAGGACCATTCCAAGGGAGGAAATGTTTCGGTTTTCTCATCGGGTCCCCTCATACTCACTTACTGGCCAAGAAGCCCCAAATGCTCCAAAGGGTTGCAGGGTGCTGGATCCAGCTGCTACCCCATCTGAACTTCTTCAAGTGATAGAAACTGTGAAGGAGGAAGAGATGATGGATAGTGAGGATGCTGGTATAAAAGAAACAAGTGATAACATGAAAGAAAACGAGTACACAGAAACGATCATTGATATGGAAAAGGTTGGTGAAGAAAAGGAGGGGAATAATAAAGATATCCAAGAGATAGAAATTTCAAAAGAGGATCGAGAAGAAGAAATGTGA 2355 0.4068 MECNKDEAIRAKEIAERKFIAKDTLGAKKFALKAQNLFPALEGIPQMLATLNVHISAENKINGEVDWYGILGANPLADEDTVRKHYRKLALMLHPDKNKSVGADGAFKLISEAWSILSDKAKRTAYDEKRNAKAGKVSTKFGGSSARTGVNGIYNFTKTTSSSARTQKSTAKDSHKSASKDSQKNIAKEHTPSSTNKSKTNTFWTVCHRCKMQYEYLTIYLNLKLLCPNCNEPFYAVETAPPPSTSWTFSQHQQSSGRQVPNKNKSNAGKNKMSPPNVGAGGYCKNDSNNHTNFQWTPFSKTSGVSNVAQAANVVQQAYDKVKRERVEAQAAMKRVEALKRKQHAFKKGYFSPAKRRKGGVEDASMSNHATEHVNQIGVANSGAGLYSVRRVENAGVGFPRDILMTKARKEINKKLGNIQSNTVDKTVVKESEDGIPKINEEGEKSVRNAETCTQTNIQKSENKKSGSEDVKSFVVNTTAKIGTKVLETIPVDVPDPEFHDFNKDRTEICFGENQVWSVYNDNDGMPRYYAMIHNVISLNPFKMQIRWLNSKTNSELGPLNWVVSGFLKTCGDFRTGKLEICDSINIFSHRVGWRKGDHGAVCIYPRKGDVWALYRNWSIYWNELTADEDIHKYDMIEVLEDFTEEQGVIVIPLVKVAGFKTVFHHHLDPREIRTIPREEMFRFSHRVPSYSLTGQEAPNAPKGCRVLDPAATPSELLQVIETVKEEEMMDSEDAGIKETSDNMKENEYTETIIDMEKVGEEKEGNNKDIQEIEISKEDREEEM* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1150 784 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lan8g1150 784 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan8g1150 784 MobiDBLite consensus disorder prediction 242 278 - -
Lan8g1150 784 PANTHER BNAC03G44070D PROTEIN 1 719 - -
Lan8g1150 784 PANTHER BNAA04G14940D PROTEIN 1 719 - -
Lan8g1150 784 MobiDBLite consensus disorder prediction 242 273 - -
Lan8g1150 784 MobiDBLite consensus disorder prediction 441 469 - -
Lan8g1150 784 SMART dnaj_3 65 122 IPR001623 -
Lan8g1150 784 Coils Coil 319 342 - -
Lan8g1150 784 MobiDBLite consensus disorder prediction 164 198 - -
Lan8g1150 784 Pfam Domain of unknown function (DUF3444) 492 697 IPR024593 -
Lan8g1150 784 Gene3D DnaJ domain 64 191 IPR036869 -
Lan8g1150 784 MobiDBLite consensus disorder prediction 755 784 - -
Lan8g1150 784 CDD DnaJ 66 119 IPR001623 -
Lan8g1150 784 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan8g1150 784 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan8g1150 784 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan8g1150 784 MobiDBLite consensus disorder prediction 169 187 - -
Lan8g1150 784 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Lan8g1150 784 MobiDBLite consensus disorder prediction 755 777 - -
Lan8g1150 784 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1150 Lan-Chr8 15531044 15535098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1150 4 294 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.323 9.19e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1150 - - gmx:100816712 1007.67