Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1147 ATGAAGTGTTCACTACATCTTCTATTCTTCACTCTTCTCTTGAATCCAACATGGGTTTATGGGAATGATGAACATAAAGCACTCATGGACTTAAAAACCTCTTTGGATCCACAAGACAATTATCTTTCTTCATGGACTATGAATGGAAACTTATGTGATGGTTCCTATGAAGGAGTGGCTTGCAATGAGATGGGCCAAGTTGCAAATATTTCTTTGCAAGGAAAAGGTCTTTCTGGGAAGCTATCACCATCTATTGCTGCTCTCAAGCATTTGACAGGACTCTACTTGCATTACAACTCTTTGTATGGAGAGATACCAAGAGAAGTTGCAAACTTGACTCAGCTAAATGATTTGTATTTGAATGTTAATCATCTTTCTGGAGAAATCCCACCTGAGATTGGTAACATGGAGAATCTGCAAGTTTTGCAGCTTTGTTACAATCACTTGACAGGAAGCATACCTACACAATTTGGTGGTTTGAAAAAGCTTAGTGTTCTTGCTTTGCAGTCAAACCAGTTAACTGGTGCTATTCCTGCTAGTCTAGGTGATTCGGGAACGTTGATGAGAGTAGATTTGAGTTCTAATCATCTCTTTGGTTCCATTCCGACAAGACTAGCTAATGTTCCTTCACTACAAGTTTTGGATGTTCATAACAACACTCTCTCTGGGAGTGTACCTCCTGCTCTGAAGAGACTAGATGATGCATTTTTGTATGAAAAGAATTCGGGGTTGTGTGGTGTTGGATTTTCATCCTTGAAAGCTTGTGGTGCTTCGGATCATGCCAATTCCACCAGACCCGAGCCTTATGATGCAGGAGTTGATGGCCTAACAAGAAATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGTAACGGAACTTGGTGCCAAAGTTATTCAAAATCCAAACAAGCAACGTCTATTAAAATTGGCATAGTGCTGGTTACAATCGCAATGTCAGCTATTGGTATTCTGACATTTGCACTGTATCGTAGGCGGAAACAGCAGCTTGGAAATGCTTTTGACATCTCCGAAAGCCGTCTAAGTACTGACCAAGGCAAGAGTGTATACAGGAAGAATGGATCTCCTTTGGTTAGCCTTGAGTACTCTAAAGGATGGGACCCGATGGCCGATAGCAGGACTTTCAGTGGGGATAGCCAAGATATGTTCCAGAATTTCAGGTTCAACTTGGAAGAAGTTGAGTCAGCTACCCAGTATTTCTCAGAGTTGAATTTGTTGGATAAGAGTAACTTCGGTGCAACTTATAAAGGAGTTCTAAGAGATGGATCTGTTGTTTCTGTTAAGTCCATCAGTAAAACTAGTTGTAAATCAGATGAAGCCGAGTTTTTGAAAGGGTTGAACATTTTAACCTCACTGCACAGTGATAATTTAGTGAGGTTGAGAGGATTTTGTTGCTCAAGGGGACGAGGTGAATGCTTCCTGATTTATGATTTTGTTTCTCATGGAAATTTGTCGCGCTACCTTGACGTAAAAGAAGGTGATGGAGAAGTCCTTGAATGGTCAACAAGAGTTTCTATTGCCAAAGGGATTGCTAAAGGTATAGCATATTTACATGCACACAAATCAAACAAACCGGCTCTTGTTCACCAAAACATCTCAGCCGAGAAAGTGCTCATTGATCAGCGGTATAATCCGTTGGTTTCAGATTCTGGCCTGTACAAGCTTCTCACTAATGACATTGTCTTCTCTGAACTGAAGGCTAGTGCAGCAAAGGGTTACCTGGCTCCTGAATACACCACTACGGGCCGGTTCACAGAGAAAAGTGATGTATATGCTTTTGGTGTGCTTCTCTTCCAGATCCTCACAGGTAAGAAGAAGGTCACTAGCTCAACGCGCCTTGCCGCAGAATCCTTCTCGTTCAAAGAATTTATGGACCCTAATCTGCATGGAAGATTCTTTGAGTACGAGGCAGCTAAACTTGCGAAAATGGCTTTACTTTGCTCCCATGAGTCTTCTTTTGAGAGGCCAACCATGGAAGCCATTGTTCAAGAACTTAGCAATTGTAGTAGTTGTATTTAA 2037 0.4138 MKCSLHLLFFTLLLNPTWVYGNDEHKALMDLKTSLDPQDNYLSSWTMNGNLCDGSYEGVACNEMGQVANISLQGKGLSGKLSPSIAALKHLTGLYLHYNSLYGEIPREVANLTQLNDLYLNVNHLSGEIPPEIGNMENLQVLQLCYNHLTGSIPTQFGGLKKLSVLALQSNQLTGAIPASLGDSGTLMRVDLSSNHLFGSIPTRLANVPSLQVLDVHNNTLSGSVPPALKRLDDAFLYEKNSGLCGVGFSSLKACGASDHANSTRPEPYDAGVDGLTRNIPETANVKLPCNGTWCQSYSKSKQATSIKIGIVLVTIAMSAIGILTFALYRRRKQQLGNAFDISESRLSTDQGKSVYRKNGSPLVSLEYSKGWDPMADSRTFSGDSQDMFQNFRFNLEEVESATQYFSELNLLDKSNFGATYKGVLRDGSVVSVKSISKTSCKSDEAEFLKGLNILTSLHSDNLVRLRGFCCSRGRGECFLIYDFVSHGNLSRYLDVKEGDGEVLEWSTRVSIAKGIAKGIAYLHAHKSNKPALVHQNISAEKVLIDQRYNPLVSDSGLYKLLTNDIVFSELKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKKKVTSSTRLAAESFSFKEFMDPNLHGRFFEYEAAKLAKMALLCSHESSFERPTMEAIVQELSNCSSCI* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1147 678 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 676 - -
Lan8g1147 678 SUPERFAMILY L domain-like 23 230 - -
Lan8g1147 678 Pfam Leucine rich repeat 136 173 IPR001611 GO:0005515
Lan8g1147 678 Gene3D Transferase(Phosphotransferase) domain 1 485 677 - -
Lan8g1147 678 Gene3D Phosphorylase Kinase; domain 1 375 484 - -
Lan8g1147 678 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Lan8g1147 678 SUPERFAMILY Protein kinase-like (PK-like) 386 671 IPR011009 -
Lan8g1147 678 Gene3D Ribonuclease Inhibitor 23 136 IPR032675 -
Lan8g1147 678 Pfam Protein tyrosine and serine/threonine kinase 411 671 IPR001245 GO:0004672|GO:0006468
Lan8g1147 678 Gene3D Ribonuclease Inhibitor 140 248 IPR032675 -
Lan8g1147 678 ProSiteProfiles Protein kinase domain profile. 406 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1147 678 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1147 Lan-Chr8 15476079 15479761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1147 4 519 Miscellaneous Gene Families AT4G22730 55.598 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lan8g1147 PK_Tyr_Ser-Thr 7.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1147 - - gmx:100789253 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1147 8 15476079 15479761 Lan8g0191 8 3223910 3227249 PCT
Lan8g0191 8 3223910 3227249 Lan8g1147 8 15476079 15479761 PCT