Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1137 ATGGATCAACAACTTTGTGCTAAAAATTGTGGCTTCTACGGTTGTGCTGCAAACAAGAACCTTTGTTCAAAGTGTTACAAAGAGTTTCTCAAAGAAAACATAACTAAATCATATGATGATGAATCTGAAACCAAGAACTTGAAGGTTAATGTCTCTGTTCATCATGGGTCATCATCTACCTCTCAAAAACCACTCGATTTTTATGAGAATGTCACTGCTAATGATGTTGTTGATGTCTGTAAGAGCGTGAAGAAGAAGAATAGGTGCAAGAGCTGCAACAAGAAGGTTGGAATAACAGGATTTGAGTGTTGTTGTGGTGATGTGTTTTGTGGAAGGCATAGATACCCAGAACTGCATTCTTGCAATGTGAATTTCAAAGAGATTGGTCGTCAAGCTTTGGCTAAACAAAACCCTATGTGCATCAATGACAAGTTAGGAAGTAGAGTTTAG 450 0.3778 MDQQLCAKNCGFYGCAANKNLCSKCYKEFLKENITKSYDDESETKNLKVNVSVHHGSSSTSQKPLDFYENVTANDVVDVCKSVKKKNRCKSCNKKVGITGFECCCGDVFCGRHRYPELHSCNVNFKEIGRQALAKQNPMCINDKLGSRV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1137 149 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 149 - -
Lan8g1137 149 SUPERFAMILY AN1-like Zinc finger 77 142 IPR035896 -
Lan8g1137 149 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Lan8g1137 149 Pfam AN1-like Zinc finger 89 122 IPR000058 GO:0008270
Lan8g1137 149 Gene3D - 1 60 - -
Lan8g1137 149 ProSiteProfiles Zinc finger AN1-type profile. 83 129 IPR000058 GO:0008270
Lan8g1137 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 149 - -
Lan8g1137 149 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Lan8g1137 149 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Lan8g1137 149 SMART AN1_Zf_4 89 126 IPR000058 GO:0008270
Lan8g1137 149 Gene3D - 61 143 IPR035896 -
Lan8g1137 149 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1137 Lan-Chr8 15356541 15357137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1137 4 145 C2H2 Transcription Factor Family AT3G52800 37.662 1.93e-24 91.3