Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1119 ATGGCTCATGAAGATTGGGATCTATTTGCAATAGTGAGAAGTTGCAAAGCTGCAACCTTTACTACCCCTACCACTACTACACAAACTCCACTTATCACCACCACAAATATTACTAGAACCCCATCACAAAAAGAAGCTACTACTTTTATTGCTAACCAAGAAAATGGCCCATTATTTTCTTTTCCTACAAATATTGTACAACCTAGGACCACTGGGTTTCAAGAACTTCATCCATTGTTCATGAACTTTAACCCCACCTCCACCATCAACACCACTAGCACTAGTGGTAATAGCATCAATCCCAATTTCATTTTTTCTGATTTTTCAGGATCCATTGAACAACAGCAACACCACCATACCACTGTTCTTTCTCCCACTACAACTTACACTTCCATTAGAGTACCCACTTCTGGTTTTGAAATATTCCAACAACAACAACAACACCTAGAAGAACCACAACAGCATCAGCAACAACAAGAACAAAAACAGCACAATCAACTGCATGTTCAAGTACCCCAAACCACTTCAATGGTTTTACCAACCACACAAACACAAACACCCAAATCAAGAAAAAGAAAAATCCAACAGAAGAAAACAGTGTCCCATGTAACTGCTGATAACCTTTCATCAGATTTATGGGCATGGAGAAAATATGGACAGAAACCCATCAAGGGTTCTCCATATCCAAGGAACTATTATAGATGCAGTAGCTGCAAAGGATGTGCAGCAAGAAAGCAAGTAGAACGAAGCACAACTGAACCAAACATGTTCATTCTCACATACACCGGAGAACACAAGCACCCAAAACCCGCTCACCGGAACTCCCTCGCTGGAAGTACCCGGAACAAAACAACCACGACCCGTTTACACCAAACACAAGAAAATGGGTCACCTTCTAGTATTGATGCTGTTTCTCCAACACAGGCAATTACAACATCTCTGTCGATGAATATGGATGGTGAAAAACTCGAACATGAATTGGGATCTGGGTCTGATGATGAAGATGTTCTGATACCAAACTCGATGGGAATTTCAGAGACTGTGTTCTTGAGTCCGAATACTGTGCCCGGGTTGGTTCTGGATTGTTCTGAAACGTCTTCTAATAATACGAGGCTTAATCCTGGTTGA 1128 0.4122 MAHEDWDLFAIVRSCKAATFTTPTTTTQTPLITTTNITRTPSQKEATTFIANQENGPLFSFPTNIVQPRTTGFQELHPLFMNFNPTSTINTTSTSGNSINPNFIFSDFSGSIEQQQHHHTTVLSPTTTYTSIRVPTSGFEIFQQQQQHLEEPQQHQQQQEQKQHNQLHVQVPQTTSMVLPTTQTQTPKSRKRKIQQKKTVSHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTTEPNMFILTYTGEHKHPKPAHRNSLAGSTRNKTTTTRLHQTQENGSPSSIDAVSPTQAITTSLSMNMDGEKLEHELGSGSDDEDVLIPNSMGISETVFLSPNTVPGLVLDCSETSSNNTRLNPG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1119 375 MobiDBLite consensus disorder prediction 146 189 - -
Lan8g1119 375 Gene3D WRKY domain 193 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g1119 375 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g1119 375 SUPERFAMILY WRKY DNA-binding domain 205 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan8g1119 375 Pfam WRKY DNA -binding domain 211 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan8g1119 375 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 349 - -
Lan8g1119 375 MobiDBLite consensus disorder prediction 265 304 - -
Lan8g1119 375 MobiDBLite consensus disorder prediction 146 202 - -
Lan8g1119 375 MobiDBLite consensus disorder prediction 275 304 - -
Lan8g1119 375 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 349 IPR044810 GO:0003700
Lan8g1119 375 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1119 Lan-Chr8 14984099 14985764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1119 188 284 WRKY Transcription Factor Family AT5G52830 81.443 5.18e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan8g1119 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1119 K13425 - aprc:113866622 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0983 7 9629181 9630905 Lan8g1119 8 14984099 14985764 LSH
Lan7g0983 7 9629181 9630905 Lan8g1119 8 14984099 14985764 PCT
Lan8g1119 8 14984099 14985764 Lan8g1119 8 14984099 14985764 PCT
Lan8g1119 8 14984099 14985764 Lan7g0983 7 9629181 9630905 PCT