Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1111 ATGGTATCCAAAAACCCAAACTCGCCTGAAGGCTTCTACCTTGATCCGAGTGGCGTGACCCTGCCGGGGCTCAACCCCTTCGCCTCCGTAACCGCCGTCGCATCTCCGGTGGATTCGGCGGCGATTTTGTCGGAGGACGCCGCCAAGAAGATCCGGAAGCCGTACACTATAACTAAGTCAAGGGAGAACTGGACTGAACCCGAACATGACAAGTTTCTCGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGCAATACAGATACGTAGCCATGCACAAAAGTACTTTTTGAAAGTTCAGAAAAGTGGGACGAATGAACATCTTCCTCCACCCAGACCTAAGAGAAAAGCTGCCCATCCTTATCCTCAGAAAGCTTCTAAAAATGCTCCTGTACTCCCACTAGTATCAGGACCTTTTGAATCTCCACCTACCTTGCTTGAGCCTGGATATATCCTGAAGCATGACTCCTCAGCAATGCTTAAAACTCCTATTATGAACACTGTGGTGCCTTCCTGGTCAAACACCACCGTGCAAGCAACTAATCTATCACATGTGCCAAAAGTGAATAATTCTTGCAGTAGTAGTGAAAGCACTCTTAGAGTGTGGCCAGTTGGTGATTTTAACGGTCAAGGGAATGATAGCCATTCATTGAGAGTTCTTCCAGATTTTACTCATGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATGTAACTGGGCATTTGCAGAAACTAAACAAGATGGACCGTATAGATGTTGAGACAGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAACTAGCCCTGATTTTGAGGATCATAGGAAGCTGCTTTCATCATATGAGGTTGAACCAGAGACAAATAACTATATCAATGCTGAAAGACCCCTTCCCAATGAACAGTTGAAGAGTGTTACTTAG 954 0.4455 MVSKNPNSPEGFYLDPSGVTLPGLNPFASVTAVASPVDSAAILSEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTAIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNAPVLPLVSGPFESPPTLLEPGYILKHDSSAMLKTPIMNTVVPSWSNTTVQATNLSHVPKVNNSCSSSESTLRVWPVGDFNGQGNDSHSLRVLPDFTHVYSFIGSVFDPNVTGHLQKLNKMDRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVEPETNNYINAERPLPNEQLKSVT* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1111 317 Gene3D - 63 111 - -
Lan8g1111 317 CDD SANT 63 106 IPR001005 -
Lan8g1111 317 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Lan8g1111 317 PANTHER SWI/SNF COMPLEX-RELATED 3 305 - -
Lan8g1111 317 MobiDBLite consensus disorder prediction 111 138 - -
Lan8g1111 317 SMART sant 60 108 IPR001005 -
Lan8g1111 317 PANTHER PROTEIN REVEILLE 6 3 305 - -
Lan8g1111 317 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Lan8g1111 317 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lan8g1111 317 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
Lan8g1111 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lan8g1111 317 ProSiteProfiles SANT domain profile. 59 110 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1111 Lan-Chr8 14705340 14712137 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan8g1111 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1111 - - gmx:100783949 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0974 7 9555178 9560726 Lan8g1111 8 14705340 14712137 PCT
Lan8g1111 8 14705340 14712137 Lan7g0974 7 9555178 9560726 PCT