Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1105 ATGGCGGTTGGACTCTCAGCCGCCATAACCATGAAGCCCCTCCGTCTCCACCACCCCTTTTTCCATCTCCACCCCAAACCAATGTCAACAATATTATTCAACCCCTTAGGCTCTTTTTGCCCCCCATTAACCCAAAGAAGGAGAAACACCACTGTTTGTGTTGTGAAGGATCCAAAACAAAGCACTCAGATAGAAAATGTAGCAGAAAATAAGAATACCCCACAAACACAAGTGAGTTATCCACCACTCATACCAACACATGTTGCAGAAAAATGGGCCAGAAAGGAGTCTGAAAGGTCAACATATCTTGTTGCTGCACTCATGTCTAGCTTAGGCTTTACATCTTTGGCTGTGCTATCTGTTTATTATAGGTTCTCGTGGCAAATGGAGGGTGGAGAGGTTCCTTGGGCTGAAATGTTTGGTACTTTTGCTCTTGCTGTGGGTGCTGCTGTGGGTATGGAATATTGGGCTAGATGGGCTCATAGGGCTCTTTGGCATGATTCCTTATGGAACATGCACGAGTCCCATCATCGACCAAGAGATGGACCATTCGAGGTGAACGATGTTTTTGCAATAATCAATGCTGTCCCTGCTATTGCTCTCCTCTACTACGGTTTCTGGAACAAGGGATTAGTCCCTGGTCTCTGCTTTGGTGCAGGTCTTGGAATTACAGCGTTTGGGATGGCCTACATGTTTGTACACGATGGCTTAGTACACAAGAGATTCCCTGTAGGTCCCATTGCCAATGTGCCCTACTTCAATAGGGTAGCTGCTGCTCACAGAATTCACCATTCAGACAAATTTGATGGGGTGCCATATGGGCTATTTTTCGGACCAGAGGAACTTGAAGATATAGGAGGGCTAGCTGCGCTGGAGAAAGAGATAAATAGGAGTTTGAAATCATATAGTCGTTCATAA 918 0.4564 MAVGLSAAITMKPLRLHHPFFHLHPKPMSTILFNPLGSFCPPLTQRRRNTTVCVVKDPKQSTQIENVAENKNTPQTQVSYPPLIPTHVAEKWARKESERSTYLVAALMSSLGFTSLAVLSVYYRFSWQMEGGEVPWAEMFGTFALAVGAAVGMEYWARWAHRALWHDSLWNMHESHHRPRDGPFEVNDVFAIINAVPAIALLYYGFWNKGLVPGLCFGAGLGITAFGMAYMFVHDGLVHKRFPVGPIANVPYFNRVAAAHRIHHSDKFDGVPYGLFFGPEELEDIGGLAALEKEINRSLKSYSRS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1105 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Lan8g1105 305 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1105 Lan-Chr8 14596811 14599571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1105 1 219 Chloroplast and Mitochondria Gene Families AT4G25700 60.455 8.55e-89 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1105 K15746 - gmx:100785541 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1105 8 14596811 14599571 Lan4g1847 4 26975176 26977424 LSH
Lan8g1105 8 14596811 14599571 Lan8g1105 8 14596811 14599571 PCT
Lan8g1105 8 14596811 14599571 Lan4g1847 4 26975176 26977424 PCT
Lan4g1847 4 26975176 26977424 Lan8g1105 8 14596811 14599571 PCT