Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1101 ATGTCTTCGCCGCGCTTTACCGCCGGTGCCGCCCCAGACTTTTTCTCCACCATCCCGTCAACAACCACCATCAACAATCTCACTACCACCACCACCCTCAACAACAACAACCACCACCTTCTCCCTTCTCACCCTATCTACAGAACTCAACAACAACAACAACATCTACCAGCAATTTTTCTAGATCCTTCTTCACAGATCCCTCAGCAACGCCATACCCAAACCCTCATGGGTAAACGCACCCTCGCTGAATTTCAAACCCATCGCAACCACAACATCCTTAACCACAACCATAACAACCTTAACAATGACCAGAACCATGTTTTCTCCAACGTGCTACTTCGCTCTGTGAAACCCAGAACAACGTTTCAACATGGTTCTACTTCTCCGTTATCTCCTATGGATTTTTCCGTTCCGGAATTACAAAGCCCTAATTTGGGTTTCCAAACGCAGCGTTTCAGCATGCCCCTTCTTCAACAGCTTCGCCCTCAACCCATTAACCTTTTCAACACCAACAACAATTCGATATTCCAGAACCCAAATTTTCCGTACCGGACCTCAAACTTGGGTCAGATTCCGAACCGGGTTCAGTTTCAACTCCAACCCACTGAACCGGAGAAAAAGATCATGGAAAACCGGCTTCAAGAACTCGAGAAACAGCTTCTTGAAGATAACGATGAAGAAGAAGAAGAAGCTGATAGAGCTTCTGTGATCACAAACAATGAATGGTCAGAAACAATTCAGAATCTGATTAGTACTAACCCAGCGCAGAAACCGGTTTCTTCGTCTCCAACTTCGTCAACTACGTCATCAACTTCATCTTCTTGCTCTATTGTATCACCTAGTTGTTCAAGACAAGCGATTTTGGAAGCTGCATCTGCGATTTACGAAGGGAAGAATGAAACTGCGTCGGAGATTTTAGCCCGGTTGAGTCGGGTCGGGTCAAACCCGAACGAGAATTCGGATCAGCGGTTAAACAATTGCATGGTAATGGCGTTGAAATCGCGTATGAACTCGGTTGATAACCCTCCTCCGGTGGCTGAACTTTTCAGTAGGGAACACGCTGAGTCGACTCAGTTGATGTTTGAAAACTCGGTTTGTTTTAAAGTAGGGTTCATGGCTGTGAACATAGCAATATTTGAAGCGGCATTTGAAGAAGGGAACGACAAAGGGTTCTGTGTTGTTGATTTTGAAATCGGGCAAGGGAAGCAATATATGAGTCTCTTGCACATGATTTCGGCGCGTAAGTCTCAATCGCCGATAGCGATGAAGGTGAAGATTTTGGCTGTGGAGGAGAATGGCGGAGAAGAGAAGCTGAGAGCGGTGGGTGAGATGCTGAGTCGCCAGGCGGAGAGGTTGAAGATCGAGTTCGAGTTCAAAGTTATGGCGATGTCTCAGAAACTCGCTGAGTTGACTCGCGAATCACTGTGTTTGGACTCGGATGAGACCGTTATTGTGAATTTTGCGTTCAAGTTGAACCGAATCCCCGACGAGAGCGTTTCCACGGAGAATCCACGCGACGAGCTTCTGAGGCGCGTGAAGGGACTCGCACCGCGTGTGGTTACGTTATTTGAACAAGAGATGAATAGCAACACGGCGCCGTTTTTGGCGCGTGTGGCGGAGTCGTGTTCGTATTACGGCGCGTTGTTTGACTCAATTGATGCTGTTATGGGGAAAGACAACTCGGTCCGAGTCAGGATGGAAGAGACGCTGTGCCGGAATCTGTGTAACTCGGTGGCGTGTGAGGGAAGGGACCGCGTGGAACGGTGTGAGGTTTACGGTAAATGGCGCGCGCGTATGAGCATGGCTGGGTTTAAGTTGAAACCACTGTGTCAGAACGTTGCCGAGTCAATTAAGTCTCGACTCGCCATGGTTAATAGCCGTGTCAACTCGGGACTCACCGTGAAAGAAGAGAATGGTGCTATTTGCTTTGGTTGGATGGGAAGAACACTCACGGTGGCATCTGCGTGGCGTTAA 1977 0.4815 MSSPRFTAGAAPDFFSTIPSTTTINNLTTTTTLNNNNHHLLPSHPIYRTQQQQQHLPAIFLDPSSQIPQQRHTQTLMGKRTLAEFQTHRNHNILNHNHNNLNNDQNHVFSNVLLRSVKPRTTFQHGSTSPLSPMDFSVPELQSPNLGFQTQRFSMPLLQQLRPQPINLFNTNNNSIFQNPNFPYRTSNLGQIPNRVQFQLQPTEPEKKIMENRLQELEKQLLEDNDEEEEEADRASVITNNEWSETIQNLISTNPAQKPVSSSPTSSTTSSTSSSCSIVSPSCSRQAILEAASAIYEGKNETASEILARLSRVGSNPNENSDQRLNNCMVMALKSRMNSVDNPPPVAELFSREHAESTQLMFENSVCFKVGFMAVNIAIFEAAFEEGNDKGFCVVDFEIGQGKQYMSLLHMISARKSQSPIAMKVKILAVEENGGEEKLRAVGEMLSRQAERLKIEFEFKVMAMSQKLAELTRESLCLDSDETVIVNFAFKLNRIPDESVSTENPRDELLRRVKGLAPRVVTLFEQEMNSNTAPFLARVAESCSYYGALFDSIDAVMGKDNSVRVRMEETLCRNLCNSVACEGRDRVERCEVYGKWRARMSMAGFKLKPLCQNVAESIKSRLAMVNSRVNSGLTVKEENGAICFGWMGRTLTVASAWR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1101 658 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 657 IPR005202 -
Lan8g1101 658 Pfam GRAS domain family 285 658 IPR005202 -
Lan8g1101 658 PANTHER SCARECROW-LIKE PROTEIN 8 71 657 IPR030013 -
Lan8g1101 658 ProSiteProfiles GRAS family profile. 275 658 IPR005202 -
Lan8g1101 658 Coils Coil 207 234 - -
Lan8g1101 658 MobiDBLite consensus disorder prediction 252 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1101 Lan-Chr8 14509219 14511489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1101 29 658 GRAS Transcription Factor Family AT5G52510 47.239 8.58e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan8g1101 GRAS 2.1e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1101 - - aip:107644872 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1101 8 14509219 14511489 Lan8g1101 8 14509219 14511489 PCT