Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1092 ATGGAAACTCCAACTACCCTCACCGGAATCCTCCGCAGCGCCGCTGATAGATTCCCCTCCCGCCGAGCCATCTCCCTCGCCGGACAGTTTGACCTCACCCACTCCCACCTCCATGACCTCGTCGAAATCGCCGCCGCCCGCCTTGTCTCCGCCGGAATCAAACCCGGCGATGTCATCGCCCTAACTTTCCCCAACACCGTCGAGTTTGTTATAATGTTTTTAGCTGTTATTCGAGCGAGAGCGACGGCAGCACCACTAAACGCGGCGTATACGGCGGAAGAGTTCGACTTTTATTTATCTGACTCAGAGTCAAAGCTTCTAATAACATCAGAAGAAGGAAATAAACCAGCTCAAACCGCAGCTTTAAAACTCAACATCCAAAACGTCACCGTCTCGTTAACCCAAACCGATTCAAAACAGCACAAACTGAATCTTAACCTCAACCAGACCGAGTCAGATCCCAATTCAAACTCAACCACCGAACTCACCAACGATCCATCCGACGTGGCACTCTTTCTCCACACTTCCGGAACCACTAGCCGCCCGAAAGGAGTACCTTTGACTCAGCACAATTTAGCCTCATCGGTTCGAAACATCGAATCGGTCTACCGACTCACTGAGTCAGATTCAACGGTTATAGTTCTCCCGCTTTTCCACGTCCACGGGTTGATCGCAGGGTTATTGAGTTCACTCGGCGCCGGCGCAGCGGTGACGTTGCCGGCGGCGGGTAGATTCTCAGCATCGACGTTTTGGAAAGACATAGTGAATTACAACGCGACGTGGTACACTGCGGTTCCTACGATACACCAAATCATACTAGATCGTCATCAGAGTAATCCTGAACCGGTTTACCCGAAGCTCCGGTTTATTCGGAGCTGCAGCGCGTCGTTGGCGCCGGCGATTCTTAGTCGGTTGGAAGAGACGTTTGGGGCGCCGGTTTTGGAGGCATATGCGATGACGGAGGCGTCGCATCTTATGTCTTCGAATCCGTTGCCGGAAGACGGAGTTCATAAGGCCGGGTCAGTGGGGAAACCGGTGGGTCAGGAAATGGCGACGTTGGATGAAACGGGTCGGGTTTTGGAAACGGGTGTGAATGGAGAGGTTTGTATTAGAGGAGAGAATGTGACGAAAGGGTATAAGAATAACCCGGAGGCTAATACGGCAGCGTTTCAGTTTGGGTGGTTTCATACTGGTGATCTTGGATATTTTGATTCGGATGGGTATTTGCATCTTGTGGGTCGTATCAAAGAGCTCATAAACCGTGGAGGAGAAAAAATATCGCCAATAGAAGTGGATGCTGTCCTTCTATCTCACCCAGACATTGCTCAAGCAGTGGCCTTTGGAGTGCCAGATGCCAAATATGGCGAAGAGATAAATTGTGCAATCATACCAAGAGAGGGATCAAACATTGATGAGGAAGAGGTGCTAAGATTTAGCAAAAAGAATCTTGCATCTTTTAAAGTCCCCAAAAAGGTTTACATCACTGATTCTTTGCCTAAGACCGCCACAGGCAAGATTTTAAGGCGCCTTGTGGCAGAACACTATGTTTCTCAAAATTGA 1560 0.4974 METPTTLTGILRSAADRFPSRRAISLAGQFDLTHSHLHDLVEIAAARLVSAGIKPGDVIALTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFDFYLSDSESKLLITSEEGNKPAQTAALKLNIQNVTVSLTQTDSKQHKLNLNLNQTESDPNSNSTTELTNDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVTLPAAGRFSASTFWKDIVNYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPAILSRLEETFGAPVLEAYAMTEASHLMSSNPLPEDGVHKAGSVGKPVGQEMATLDETGRVLETGVNGEVCIRGENVTKGYKNNPEANTAAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDAKYGEEINCAIIPREGSNIDEEEVLRFSKKNLASFKVPKKVYITDSLPKTATGKILRRLVAEHYVSQN* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1092 519 Pfam AMP-binding enzyme 12 421 IPR000873 -
Lan8g1092 519 Gene3D - 6 414 IPR042099 -
Lan8g1092 519 PANTHER OXALATE--COA LIGASE-LIKE 1 518 - -
Lan8g1092 519 PANTHER ACYL-COA SYNTHETASE 1 518 - -
Lan8g1092 519 ProSitePatterns Putative AMP-binding domain signature. 172 183 IPR020845 -
Lan8g1092 519 Gene3D - 415 517 IPR045851 -
Lan8g1092 519 SUPERFAMILY Acetyl-CoA synthetase-like 4 517 - -
Lan8g1092 519 Pfam AMP-binding enzyme C-terminal domain 430 505 IPR025110 -
Lan8g1092 519 CDD FACL_fum10p_like 19 513 IPR045310 GO:0016874
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1092 Lan-Chr8 14226081 14231352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1092 5 518 Monolignol Biosynthesis Gene Families AT4G05160 30.483 3.67e-58 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1092 K22133 - gmx:100817853 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0948 7 9144997 9149130 Lan8g1092 8 14226081 14231352 LSH
Lan8g1092 8 14226081 14231352 Lan13g0741 13 7396448 7400307 LSH
Lan7g0948 7 9144997 9149130 Lan8g1092 8 14226081 14231352 PCT
Lan8g1092 8 14226081 14231352 Lan8g1092 8 14226081 14231352 PCT
Lan13g0741 13 7396448 7400307 Lan8g1092 8 14226081 14231352 PCT
Lan8g1092 8 14226081 14231352 Lan7g0948 7 9144997 9149130 PCT
Lan8g1092 8 14226081 14231352 Lan13g0741 13 7396448 7400307 PCT