Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1078 ATGGCAGCTAAAGGTGAGATTGTATCAATTGAAACCATTAAGCCATCCACTCCAACCCACGACCATCTGAGAGACCTCAAACTCTCTCTCCTTGATCAATTGCTTCCAAATCAAATATACATTCCCCTTCTCCTATGTTACTCACACCATGATATCAACAATGCTTTTGGGGGGACTAGTGATCATTTCTCAACCATATCTCAAAAGTTGAAGACTTCTTTATCACAAGCTCTCACTCTTTACTACCCATATTGTGGAAAACCAGTGAAAGACAATCTCTCAATAGAGTGCAATGATACGGGTGTGGTTTTCATTGAATCTAAAGTCAATGCAAAACTCTCAGACATTCTCAATAACCCTCTACTTGAACTGATGGTGAAAGATTTTCTCCCATTTGATCCATACAACTTTGATGCACCTGAGGCAAATTTGGCAGTTCAATTGAATCAATTCAGCTGTGGGGGTATAGCAATTGGTGTTTCCTTCAACCACAAGCTAGGTGATGCTATAACTTTAGGATGTTTTCTCAGAGCTTGGTCTTTACTTGCAAGAGGACAGGGTAGCTTAATGGTAGCACCTCAAATGGAAACATCTAATTTGTATTTCCCACCAAAGAACATAGAAAAGATCAATTTTCGTGACGTGATTTGCAAAGAAGAAATTGTAACAAAGAGATTCATGTTTAGTGGGACTAACCTCTCTAGGCTAAGAGACAAACTTAGCAGTTCCATTCAAAATCTCTCTCGTGTTGAGACCGTGACAGCACTCATTTGGAAATCAGCCCTGGAAGCAGCAGCAAAAACAAGTTCTAAGGAACAAATATTTCATGCTTCTAAGGTGTGTCACGTGGTGAACATTCGAGGCCGAGTGGTCCCACCATTACCCGAGGTTACGAGAGGAAATTTGTTTGTACAGTCACTATCTCCAAAACTGGAATTGAAAGGAGAGGTAGGGTTGCATGATTTTGCAGAAATGGCCAGAAAAGCTGTGAGAAGTGTTGATAAAGATTATGTAAGCAAAATCATAGGTGATGGAATCCTTGAGGTCATAGAAGAAATGATAGCAAACAAAGAAGAAGGTGTTCCAGTTTATACGTTTAGCAGTGTGATAGGAATGGATTGCTATGAAAATGATTTTGGATGGGGAAAACCAACATGGGTTGGTACTGTGGGTGGAAGACCTATGAAAAATGCAGTAATTCTCTTTCCCACTAGAGATGGGAAAGGAACAGAAGCATGGATAACACTCTCTAAAGTTGACATGGTTGAATTTGAGCGCAATCCAGAACTTATCCACTATACTTCAGTTAATTGTTAG 1317 0.3986 MAAKGEIVSIETIKPSTPTHDHLRDLKLSLLDQLLPNQIYIPLLLCYSHHDINNAFGGTSDHFSTISQKLKTSLSQALTLYYPYCGKPVKDNLSIECNDTGVVFIESKVNAKLSDILNNPLLELMVKDFLPFDPYNFDAPEANLAVQLNQFSCGGIAIGVSFNHKLGDAITLGCFLRAWSLLARGQGSLMVAPQMETSNLYFPPKNIEKINFRDVICKEEIVTKRFMFSGTNLSRLRDKLSSSIQNLSRVETVTALIWKSALEAAAKTSSKEQIFHASKVCHVVNIRGRVVPPLPEVTRGNLFVQSLSPKLELKGEVGLHDFAEMARKAVRSVDKDYVSKIIGDGILEVIEEMIANKEEGVPVYTFSSVIGMDCYENDFGWGKPTWVGTVGGRPMKNAVILFPTRDGKGTEAWITLSKVDMVEFERNPELIHYTSVNC* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1078 438 PANTHER F21J9.9 2 437 - -
Lan8g1078 438 Gene3D - 218 432 IPR023213 -
Lan8g1078 438 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 2 437 - -
Lan8g1078 438 Pfam Transferase family 6 430 - -
Lan8g1078 438 Gene3D - 3 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1078 Lan-Chr8 13937643 13939494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1078 58 426 Monolignol Biosynthesis Gene Families AT5G48930 24.697 3.12e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1078 - K13065 gmx:100792323 382.489