Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1049 ATGGGGAATGGGATAGAGATTGTTGAACCAAACAGGTGTATTAGAGGATGCTGCTCCAGTTCCTCTATTCCTCTTCATCTCCCTCCTTCCTCTTTTACTCTTCTCTCTCCTATTGCTCGAGGGGCAGAGAGTGTTGTTTATGAAGGGACACTGGATGGAAAGAAGGTTGCTGTGAAGAAACCTATCTTGTCAATTTCAGATGACATTGATAAGTTTCATAAAGAATTACAATTGCTATGCAAGCTAGATCACCCGGGAATCGCTACACTTATTGCTGCCCATGCAAAGCCACCCAACTACATGTTTTTCTTCAAGTTCTATGAATCTCTGAGTCTCACGCATAAGTTACACGTGGAAGAATGGGCCCCGACTATCAGTCACACGCTTATGATAACAATTCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACAAAAATCTTTGTCCACACCTCACAGATTTTGGTTTGGCCGAATACATTAGTGATCTTAAGGGAGTTTCTTTTGTGAATTGGAAGTCTTCTGGAAAGCCTACAGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGCAGTTACATACAGAAAAGTCTGATGTGTACAGTTTTGGGGTCTCAATCAATGAAGTTCTTACTGGTGTTGTGCCATATACTGATCTTCGCGCGGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTGACATCAGCTGTTGTTTCTGATGGATTACGGCCAGCCCTTGCTACTGAGGAGTTGGGTATACCATCACGGTTATTATCAATAATACAGAAGTGCTGGGATGAAAATCCTGAAAAACGGCCTTCCTTTGATGATATTGTTAAGGAACTTGATTTCATAATGGAGGACAGGAAAATACACAATGCCGAAGATACATATATCAGAACTCGTAACTTGCGTGATGATCAGCTAGAGGACGAGACCCTTCAGCCTTATGAAGAGAGTATTAACTGGTCCTCTCAAGGTGAACTTTTGGCTAGGAGTGTCTCTAGTGCAACTGACTCTGATTTGAGAACCTGGCATGAGTCTTCTGATGAGCCTGTGGCCTTCCATCCAACACTCTCTTGGGGATCTTATGCTACCTGTGGGCGAAGAGAGACTATGGAGGACACTCATTTTGTTCTGCCCCATATGTGCAATGAAAAGGATCTCTATGGTTTTGGTATTTTTGATGGTCATAGAGGTGCAGCAGCGGCAGAGTTTTCTTCAAAAGCTGTACCAGCATTTTTGCAAACTTTAGGTTTTACAGGCAGTCCTGCTAATGCATTGGTTGAAGCGTTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTTCCATCGCAAATCGAACAGATATATCCAGAAGGATTGGCATCCTGGTTGTACCGCAATCGCTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATAGGTGATTGCAGAGCAATCTTATGTCGTGCTGGTAATCCCATCGCTCTTAGTAAGGATCATGTTGCTAGCTGTCCTCAAGAGAGAGAGCGCGTTATTCGACATGGGGGCCAAGTACATTGGCAAGTTGATACTTGGAGGGTTGGTCTTCCTGCGCTTCAGGTTACTCGTTCTATTGGCGACGATGATCTTAAGCCAGCTGTAACTGCAGAACCTGAGATAACTGAGAGGACCTTATCTGCAGAGGATGAATATCTTGTTATGGCTAGTGATGGACTTTGGGATGTCCTAAGCAGCATAGAAGTCATAAATATAATAAAAGACACAGTTAAAGAGCCTGGAATGTGCTCTAAGAGGTTAGCTACTGAAGCAGTAGAACGTGGAAGCAAAGATAACATTACAGTTATTGTTGTATTTTTATGTCCTGTATCTACAGCTGAGAGAATTTATTAG 1977 0.4254 MGNGIEIVEPNRCIRGCCSSSSIPLHLPPSSFTLLSPIARGAESVVYEGTLDGKKVAVKKPILSISDDIDKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKFYESLSLTHKLHVEEWAPTISHTLMITIQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYISDLKGVSFVNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKQLHTEKSDVYSFGVSINEVLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTSAVVSDGLRPALATEELGIPSRLLSIIQKCWDENPEKRPSFDDIVKELDFIMEDRKIHNAEDTYIRTRNLRDDQLEDETLQPYEESINWSSQGELLARSVSSATDSDLRTWHESSDEPVAFHPTLSWGSYATCGRRETMEDTHFVLPHMCNEKDLYGFGIFDGHRGAAAAEFSSKAVPAFLQTLGFTGSPANALVEAFIRTDAAFRKELDFHRKSNRYIQKDWHPGCTAIAALVVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCPQERERVIRHGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITERTLSAEDEYLVMASDGLWDVLSSIEVINIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLCPVSTAERIY* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1049 658 PANTHER PROTEIN PHOSPHATASE 2C 4 658 IPR015655 GO:0004722|GO:0006470
Lan8g1049 658 CDD PP2Cc 393 648 IPR001932 -
Lan8g1049 658 SUPERFAMILY PP2C-like 385 648 IPR036457 -
Lan8g1049 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Lan8g1049 658 SMART serkin_6 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1049 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Lan8g1049 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lan8g1049 658 Gene3D Transferase(Phosphotransferase) domain 1 20 345 - -
Lan8g1049 658 SMART PP2C_4 381 646 IPR001932 -
Lan8g1049 658 SMART PP2C_SIG_2 406 648 IPR001932 -
Lan8g1049 658 PANTHER - 4 658 - -
Lan8g1049 658 Gene3D - 382 650 IPR036457 -
Lan8g1049 658 SUPERFAMILY Protein kinase-like (PK-like) 25 332 IPR011009 -
Lan8g1049 658 Pfam Protein kinase domain 34 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1049 658 ProSiteProfiles Protein kinase domain profile. 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1049 Lan-Chr8 12957607 12966539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1049 101 658 PP2C-type Phosphatase Gene Family AT2G40860 65.954 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lan8g1049 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1049 - - gmx:100785390 1080.09