Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1044 ATGGAGAAGAGCCTTGTAGAACACTCCACTAGTTTTTCTCATCATAAGAATGATAATAACACCAACATTGTCTCTGAAGATGGTAGTGATGGTAAAACATTGCCTGGACCTGCAGAAAATGTTGATCATGCAATTATAAAAGATGAGGAAAGTTTAAAACAAGAAGTTGAAAATGTCGAAGAAGAAATTAAAAAAACTGAAGAGGATGATGTTGATGCTAAAGGTAAAAAGGAAGAAGAAGAAGATGTTGTTGCTGAGATTCCTCCTGAAACTCCTCCTCCTAGGTTGGAGAATGTTTTTGAAGACATTGATGCATATATCAATGCAAATTCTACGTCAGAGATTCCTGATTTCGTTCACATGTTCTTAGATATTGTGGAAGAGAAGATCACAAGCTATGACACAGGAAAAACCAAATGGGGTGAAGCTAAGGAAGAAGATTCATCATTGTTAGAAGCCATTGATCGCATTTCGAAACTGATAAAACTGATACCCGGGTCATCGATATCATCATCACAAATCCAAGAAGAAGAAGAGATCGATGCAAAGAATGTAAAAGACTCATTGTTGAAGAATCGCATTGGTGCAATTCATCAACAAGCAATGTCGTATTTGGAGGACGAGTTTCAATCGTTAATAGATGAACCGCAAAATCGAATTGAAACCGATCCGAGCAAACACAATTCAAAAGGAAAACACGTGACAGAAGCACAACCACAACCATCTGATTCTGAACCTGGATCAGAACGACTTCCTAATTTCCCCGGTTATGGAGATGAAGCAATATCCAATCTAAACAACATAGCAATGAAAATGATATCAGGTGGTTACCAATCAGAGTGCTATAATATATACTTTATTTCACGAAAACACGCCCTTGAAGAAAGCTTACACAAGCTAGGGTTAGAGAAAATAAGCATAGATGATGTTCATAAGATGCAATGGGAAGCATTGGAGAGGGATATTCCAAAATGGAACAACACTTTCAAGGAATGCATGGAAGTATATTTCCCCGGCGAGAGGAAGCTGGCGGAGGCGGTGTTTTCCGATCACCGGGAAGTGGCAGATAGTGTGTTCATGATGGTGTGCCACCGTATGGTGATTCGAATTGTGAACTTTGCAGAAGCGATTGCACTGACGAAGCGTTCTGGGGAGAAATTGTTCAAGTTTCTAGATATGTATGAGACGTTAAGGGATTTGAATATGAATTTGGATAATTTGTTTCCTCAAGAATTTGTGGAAGAGTTGAAGGCTGAAACAACTTCTGCTAAGTGTAGGGTTGGTGAATCTATTATTGTTATTTTTTGTGAACTTGAGAACTCTATCAAATCTGATACCGGTAAAACACCAGTTGCCGGTGGCGCAGTTCATCCACTTACTAGGTACATCATGAACTACTTGAAGTTCGCATGTGAATACAAAGATACATTGGAGGATGTGTTCAAAGAGCACTCAAAGATAGAACGTGCAGATTCTACTAGTAGACCCTATTATGAAGCTGAGAACAAAAATGAAAACCATAGGGTAAATAATAATAGTAGTAATAATGATAATAATAATAATAAGGAAAATGTTTCACCATTTGCAGCACAACTAATGAGGGTAATGGAATTACTTGACTCAAATTTAGAAGGTAAGGCAAATTTGTACAAGGATTCTGCATTAAGTAGCATATTCATGATGAACAATGGAAGGTACATAGTTCAAAAAATAAAAGGGTCTCCAGATTTATATAAAGTAATGGGTGAAACATGGTGTAGAAAAAGATCCTCAAATCTAAGGACATACCATAAGAACTATCAGATTGAAACATGGAGCAAAATATTAGGTTGCTTGAGTCCTAAGGGATTGAATGACAATGGTAAGGTACATAAGCCTGTGCTTAAGGAAAGGTTCAAAAGCTTCAATGCATTGTTTGAAGAGATACATAAGACACAGAGCACTTGGGTGGTGAGTGATGAACAGCTTCAATCAGAACTTAGGGTTTCTATATCAGCACTTGTTATTCCAGCTTATAGGTCATTTTTGGGAAGGTTTTCACAGTATTTGGCTCTAGGGAGACAAACAGAGAAGTATATAAAGTTTCAAGCTGAAGATATAGAGACTTATATTGATGAGTTATTTGATGGGAACCCTCATCATCAGTCTCTTGCAAGAAAGAAAGCATGA 2169 0.3753 MEKSLVEHSTSFSHHKNDNNTNIVSEDGSDGKTLPGPAENVDHAIIKDEESLKQEVENVEEEIKKTEEDDVDAKGKKEEEEDVVAEIPPETPPPRLENVFEDIDAYINANSTSEIPDFVHMFLDIVEEKITSYDTGKTKWGEAKEEDSSLLEAIDRISKLIKLIPGSSISSSQIQEEEEIDAKNVKDSLLKNRIGAIHQQAMSYLEDEFQSLIDEPQNRIETDPSKHNSKGKHVTEAQPQPSDSEPGSERLPNFPGYGDEAISNLNNIAMKMISGGYQSECYNIYFISRKHALEESLHKLGLEKISIDDVHKMQWEALERDIPKWNNTFKECMEVYFPGERKLAEAVFSDHREVADSVFMMVCHRMVIRIVNFAEAIALTKRSGEKLFKFLDMYETLRDLNMNLDNLFPQEFVEELKAETTSAKCRVGESIIVIFCELENSIKSDTGKTPVAGGAVHPLTRYIMNYLKFACEYKDTLEDVFKEHSKIERADSTSRPYYEAENKNENHRVNNNSSNNDNNNNKENVSPFAAQLMRVMELLDSNLEGKANLYKDSALSSIFMMNNGRYIVQKIKGSPDLYKVMGETWCRKRSSNLRTYHKNYQIETWSKILGCLSPKGLNDNGKVHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLALGRQTEKYIKFQAEDIETYIDELFDGNPHHQSLARKKA* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1044 722 MobiDBLite consensus disorder prediction 219 256 - -
Lan8g1044 722 Gene3D Exocyst complex component Exo70 132 717 - -
Lan8g1044 722 MobiDBLite consensus disorder prediction 492 524 - -
Lan8g1044 722 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 66 713 - -
Lan8g1044 722 MobiDBLite consensus disorder prediction 507 524 - -
Lan8g1044 722 MobiDBLite consensus disorder prediction 219 233 - -
Lan8g1044 722 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 713 IPR004140 GO:0000145|GO:0006887
Lan8g1044 722 Pfam Exo70 exocyst complex subunit 324 706 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan8g1044 722 SUPERFAMILY Cullin repeat-like 143 709 IPR016159 -
Lan8g1044 722 MobiDBLite consensus disorder prediction 1 95 - -
Lan8g1044 722 MobiDBLite consensus disorder prediction 492 506 - -
Lan8g1044 722 Coils Coil 46 76 - -
Lan8g1044 722 MobiDBLite consensus disorder prediction 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1044 Lan-Chr8 12734686 12738219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1044 114 721 EXO70 exocyst subunit family AT5G13990 51.274 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1044 K07195 - gmx:100819960 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1044 8 12734686 12738219 Lan20g1511 20 21961909 21965959 LSH
Lan10g1107 10 16291424 16294164 Lan8g1044 8 12734686 12738219 PCT
Lan8g1044 8 12734686 12738219 Lan10g1107 10 16291424 16294164 PCT