Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1022 ATGGAAGAACCAGTTGTGGTGAACAAAGGAGAAGAATCTCTAGGGTTGCCTCCAGGTTTCAGATTCCAACCAACTGATGAAGAAATCATCACTTGTTATCTCACACAGAAAGTGTTAAATAGCAGTTTTAGTGCAATTGCTATGGGTGAAGCTGATTTCAACAAGTCTGAGCCTTGGGATTTGCCTAAGAAAGCCAAGATGGGGGAGAAAGATAATTGGTACTTCTTTTGCCAAAGAGATAGGAAGTATCCAACAGGAATGAGAACAAACCGTGCTACACAATCAGGATATTGGAAAGCCACAGGAAAAGATAAGGAGATATACAAAGGGAAAGGTAACTTGGTAGGGATGAAGAAGACCCTTGTATTCTATAGAGGGAGAGCTCCAAAGGGAGAAAAGACTAATTGGGTTATGCATGAATTCAGATTGGAAGGAAAATATGCAAATTATAACCTTCCTAAGGCTGCAAAGAATGAATGGGTTGTCTCAAGGGTTTTTCATAAGAACACAGATGTTAGAAAAATCCCACTTTTTAAGATTAACTCAATTGAGAATGATCTTCTTGATTTTTCTTCAATACCACCTCTCATGGATCCTCCTTATTGCACTAACCAACCTTCTTCATCATCAAATAGCTACTATTCTCCAAGTCTCTTCATCAACAACAATCAAATCCAGAATATGCTAATGAAACCAGAAGAACATAGACCCTATGAGATTCCTATTCCTACCAATAACCAAGGAAATTTCATCAGTAATGGTCCAATAATGTGGAACACAATTTCTCAGCCTCATAAGGATTATGAAGAAAACATGCCTATATTGTTGAACAACATGCAGTGCAAGATGGAGCAATTTTCTTCTAATAACCACTCTATGGTAAGTGTGTCTCAAGACACATGCATCAGCAATGACAGAAACACTGAAACAACATCTTCAGTGGTTTCAAAACATGACAATATAGGAAGGAATAATAATAATAATAATAATATTGGAGCATTATATGATGATCTTGAATGTCCATCTTCAGTTGCTACAGTACTCTCAGATTTGGAATGCATGTGGGATAATAATATTGACTACTGA 1086 0.3702 MEEPVVVNKGEESLGLPPGFRFQPTDEEIITCYLTQKVLNSSFSAIAMGEADFNKSEPWDLPKKAKMGEKDNWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKYANYNLPKAAKNEWVVSRVFHKNTDVRKIPLFKINSIENDLLDFSSIPPLMDPPYCTNQPSSSSNSYYSPSLFINNNQIQNMLMKPEEHRPYEIPIPTNNQGNFISNGPIMWNTISQPHKDYEENMPILLNNMQCKMEQFSSNNHSMVSVSQDTCISNDRNTETTSSVVSKHDNIGRNNNNNNNIGALYDDLECPSSVATVLSDLECMWDNNIDY* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1022 361 Gene3D NAC domain 25 173 IPR036093 GO:0003677|GO:0006355
Lan8g1022 361 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan8g1022 361 PANTHER NAC DOMAIN-CONTAINING PROTEIN 87 7 317 - -
Lan8g1022 361 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Lan8g1022 361 SUPERFAMILY NAC domain 12 169 IPR036093 GO:0003677|GO:0006355
Lan8g1022 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1022 Lan-Chr8 12192277 12194286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1022 1 314 NAC Transcription Factor Family AT5G18270 55.723 1.65e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan8g1022 NAM 4.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1022 - - gmx:100784372 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1022 8 12192277 12194286 Lan20g1475 20 21480438 21482740 LSH