Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1012 ATGGCAACTAGATTACATTCTTCAATGCTTCTAGTTTTGGTTACAATTACACTTTTCATATATCATTCAGAACAACTTCAATCCTCAAATTTTCAGTCTCATACCCTTTTAAGTATTCAACATCAATTGCACTTTCCTTCTGTTTTAAGAAGCTGGAATAACAACATAGACTTTTGCAACACAAATTCCAAATCATCTCTTACCATTGTATGCTATGAGGACACTATAACTCAGCTTAACATTGTCGGCGAAACAAGAACTCCACTTCTTCCTAAAAACTTCTCAATAGATAACTTTGTCACAACCCTTGTAAGGCTCCCTAGTCTTAAAGTCCTAACACTGGTTTCTCTGGGTATATGGGGTCCGTTGCCCGGAAAAATCGCTCGGTTGTCGTCGCTGGAAATAGTTAATGTGAGTTCGAATTTTCTCTATGGTAGCATCCCTCAAGAGTTTTCATCACTGTTGCATCTTCAGACCCTCATTCTTGATGATAACATGTTTGCTGGCCATATTCCTCACTGGCTGGATTCCTTTCCGGCATTAACCGTGTTGAGTTTGAAAAGCAATTTGTTCAACGGTACTCTTCCGAATTCACTTGGTAGATTGGAGAATCTGAGAATCCTATCACTTTCTCATAACCATTTTTATGGATCAGTACCTGATTTGAGCCACTTGACAAATCTGCAAGTGCTTGAATTGGATGATAACGCTTTCGGACCGCAGTTTCCTCGGCTCGGTAACAAGTTGGTTACACTAGTACTAAGAAATAATAAGTTCAGATCTGGTATCCCTGATGAAATGAGTTCATATTATCAGCTTGAGAGGTTTGATATCTCATCAAATGCATTTGTTGGGCCACTCCAGCTAGCACTTTTATCACTTCCTTCGATTACTTATCTCAACATTTCTAGAAACAAACTATCAGGAATGCTTTTTGAGAATCTGTCTTGCAGTTCTGGACTTGAAGCAGTGGATTTATCCTCAAATCTTTTAACCGGTAACTTACCGAAAAGTCTATCGTCAAATTCGAATGGTAGGACTGTTCTGTATGCTAATAATTGTCTAGAGGAGACTGATCAAAATCAGCATGCACTACCCTTTTGCCATACTGAAGCCATAGCTGTGGGAATATTACCAGAGAGAAAGAAACATAAACAAGCATCTATGGCAGCCATTGCAATTGGAATAGTATGTGGAACTTTTGCATGTGTAGCACTTTCTATGCTGATTTTCTTTATCATTAGAAGAGTAAATTCCGAAAGCAAACTGAAGAGTCCTGCAACAAAGTTAATATCAGACAATGCAACTTCTGGATACACCTCTAAGTTACTCTCTGATGCAAGGTACATATCTCAAGTTTCTCAACCAATGAAGTTTGGATCAGTTGACCTGCCACCATACCGAACTTTCTCATTGGAAGAGATCGAGGCGGCTACAAATAATTTCGACACATCTTCTTTTATGGGTGAAAGTTCTAAAGGGCAGATGTACAGAGGTCAGCTGAGGGATGGTTCACTTGTTGCCATTAGATGTCTTAAAATGGTGAAAAGCCATAGAACTGAAGACTTTATGCACCAAATCGAGTTGCTATCGAAACATCGACATCGCCATTTAGTCAGCGCTCTTGGACACTGCTTCGAATGTTACTTAGATGACTCAAGTGTCAGCAGATTATTTCTTGTATTTGAGTATGTACCAAATGGCACACTCAAGAGCTGGATCTCAGATGGGCATTACAGAAAATCGTTGAGTTGGAATCAACGAATCGCAGCCGCAATTGGAGTAGCAAAGGGCATCCATTTTTTGCATACAGGGATTGTTCCTGGTGTATATTCAAACAATCTCAAGATAACAGATGTTTTGTTGGATCAGAATTTTGTTGCAAAAATAAGCAGTTATAACTTACCTTTGTTATGTAATATGGGAAAGGTTGGGTGTGGAAATCCTTCCAGTGGATTCAAAGGTCCTAGCATTAACAAAAGTGTAACACATGAAGATAAGTCTGACATATATGAGTTTGGAGTAATACTAATGGAATTCATTCTAGGAAGGACAATAAAGCCAAGAAATGTAGACACTTTAAAGGATCTGTTACAAGCAAGTATAGCAGCTGATGATGAAGCTAAGAGGAGCATTATAGATCCATCAATTAGAAATACATGCATGGATCAATCATTGAAGACAATGATGGAGATTTGTGTAAGGTGTTTGGTTAAAGAGAATGAAGAAAATCCTTCATTAGAGGATGTTTTGTGGAATTTGCAATTTGCTGCACAAGTCCAAGATGCATGGAGATGTGACTCTCAAATAAGTAGTGAGGGATCTCCTATCTCACCTTTACCATCTAGACCAATGACCTTCCACTAG 2367 0.387 MATRLHSSMLLVLVTITLFIYHSEQLQSSNFQSHTLLSIQHQLHFPSVLRSWNNNIDFCNTNSKSSLTIVCYEDTITQLNIVGETRTPLLPKNFSIDNFVTTLVRLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNVSSNFLYGSIPQEFSSLLHLQTLILDDNMFAGHIPHWLDSFPALTVLSLKSNLFNGTLPNSLGRLENLRILSLSHNHFYGSVPDLSHLTNLQVLELDDNAFGPQFPRLGNKLVTLVLRNNKFRSGIPDEMSSYYQLERFDISSNAFVGPLQLALLSLPSITYLNISRNKLSGMLFENLSCSSGLEAVDLSSNLLTGNLPKSLSSNSNGRTVLYANNCLEETDQNQHALPFCHTEAIAVGILPERKKHKQASMAAIAIGIVCGTFACVALSMLIFFIIRRVNSESKLKSPATKLISDNATSGYTSKLLSDARYISQVSQPMKFGSVDLPPYRTFSLEEIEAATNNFDTSSFMGESSKGQMYRGQLRDGSLVAIRCLKMVKSHRTEDFMHQIELLSKHRHRHLVSALGHCFECYLDDSSVSRLFLVFEYVPNGTLKSWISDGHYRKSLSWNQRIAAAIGVAKGIHFLHTGIVPGVYSNNLKITDVLLDQNFVAKISSYNLPLLCNMGKVGCGNPSSGFKGPSINKSVTHEDKSDIYEFGVILMEFILGRTIKPRNVDTLKDLLQASIAADDEAKRSIIDPSIRNTCMDQSLKTMMEICVRCLVKENEENPSLEDVLWNLQFAAQVQDAWRCDSQISSEGSPISPLPSRPMTFH* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1012 788 Pfam Protein tyrosine and serine/threonine kinase 487 751 IPR001245 GO:0004672|GO:0006468
Lan8g1012 788 SUPERFAMILY Protein kinase-like (PK-like) 462 756 IPR011009 -
Lan8g1012 788 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 9 776 - -
Lan8g1012 788 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Lan8g1012 788 Gene3D Ribonuclease Inhibitor 248 370 IPR032675 -
Lan8g1012 788 ProSiteProfiles Protein kinase domain profile. 482 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1012 788 Gene3D Ribonuclease Inhibitor 29 247 IPR032675 -
Lan8g1012 788 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 776 - -
Lan8g1012 788 SUPERFAMILY L domain-like 34 355 - -
Lan8g1012 788 Gene3D Phosphorylase Kinase; domain 1 452 564 - -
Lan8g1012 788 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Lan8g1012 788 Gene3D Transferase(Phosphotransferase) domain 1 566 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1012 Lan-Chr8 11995818 12000698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1012 44 783 Miscellaneous Gene Families AT3G03770 60.933 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lan8g1012 PK_Tyr_Ser-Thr 4.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1012 - - gmx:100813207 1210.67