Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1010 ATGAGTTCATATTATTTTAACAATGGTGCTATGATTCGTTCTTCTTGTGCTTTGGTTCCACAACAACCTCTTCTGACCAACCCTTTTGGGGTTGAAGTTGGTAATGAAGTTGAGTGTTGGAATTCATCTTATGCAGTGAAAACTAAACTTTGTCCTAGAGGACATTGGAGGCCAGGTGAAGATGCTAAACTCAAAGAACTTGTTCATCAATTTGGTCCTCAAAATTGGAACTACATTGCAGAACATTTTGAAGGAAGATCAGGCAAAAGTTGTAGACTGAGGTGGTTTAATCAGCTAGATCCAAGAATTAACAGAAGCGCTTTCACTGAAGATGAGGAAACAAGGCTCATAACTGCTCACAGTTTATATGGTAATAAATGGGCTTTGATTTCTAGGCTCTTCCCTGGCAGAACAGACAATGCAGTCAAGAACCAATGGCATGTGATGAAAGCTAGAAGAGTGAGGGATGAGTTAAATCACTATAGAAAGAGAAACTACCCTAACTTTCAAATGGGTTTGAATCTGAATCTTTCAAACAATGCAACTAGTGTATCAACCAACTCAAGCATCATAAATGAATCTGTCTCAACCTGCAATAACATATCTCTTACTGCATCTTCAGCCACACCAATTTTCATGCCATTTTCTAACCTTGATCCAGTTCATAATCATCAAGCATATGGATCCCAAATGGGTTTATTAGGAGAAAGGATGGTGCAAAATGAGCAAGTGGATTTTGGCAACTTTTTTGGTGCTTGGAATGGTGTGGTGGACCAACCCAATTATTCAGATTCAAACTCAGAAGTCTCAGCATCTGAGTCAGTTAGCACAAAGAGGACCACAAATCTCTCAAATTCTGATGAAAGTGAAAACATTTATGATAATATTCAAAAGCCATTCATTGACTTTCTTGGACTAGGAGATGCATAG 930 0.3839 MSSYYFNNGAMIRSSCALVPQQPLLTNPFGVEVGNEVECWNSSYAVKTKLCPRGHWRPGEDAKLKELVHQFGPQNWNYIAEHFEGRSGKSCRLRWFNQLDPRINRSAFTEDEETRLITAHSLYGNKWALISRLFPGRTDNAVKNQWHVMKARRVRDELNHYRKRNYPNFQMGLNLNLSNNATSVSTNSSIINESVSTCNNISLTASSATPIFMPFSNLDPVHNHQAYGSQMGLLGERMVQNEQVDFGNFFGAWNGVVDQPNYSDSNSEVSASESVSTKRTTNLSNSDESENIYDNIQKPFIDFLGLGDA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1010 309 MobiDBLite consensus disorder prediction 264 287 - -
Lan8g1010 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 154 IPR017930 -
Lan8g1010 309 ProSiteProfiles Myb-like domain profile. 100 150 IPR001005 -
Lan8g1010 309 Gene3D - 53 104 - -
Lan8g1010 309 SUPERFAMILY Homeodomain-like 52 146 IPR009057 -
Lan8g1010 309 Gene3D - 106 170 - -
Lan8g1010 309 CDD SANT 56 97 IPR001005 -
Lan8g1010 309 CDD SANT 107 150 IPR001005 -
Lan8g1010 309 Pfam Myb-like DNA-binding domain 53 99 IPR001005 -
Lan8g1010 309 Pfam Myb-like DNA-binding domain 105 149 IPR001005 -
Lan8g1010 309 SMART sant 52 101 IPR001005 -
Lan8g1010 309 SMART sant 104 152 IPR001005 -
Lan8g1010 309 PANTHER MYB PROTEIN-RELATED 41 308 - -
Lan8g1010 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 99 IPR017930 -
Lan8g1010 309 PANTHER OS08G0435700 PROTEIN 41 308 - -
Lan8g1010 309 ProSiteProfiles Myb-like domain profile. 53 99 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1010 Lan-Chr8 11964977 11967044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1010 45 219 MYB Transcription Factor Family AT5G17800 56.216 2.50e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan8g1010 Myb_DNA-binding 6.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1010 K09422 - gmx:100791795 279.256