Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1004 ATGGGGTCTCAAGATGAGTCAATTCAAGAGCCAAAGGGTGCACCTTTGGTGCAGCCTTTGGTTAGGGAAGGGTCCTTGTATAATCTCACCCTTGATGAGGTTCAGAACCAGCTTGGGAATTTGGGGAAACCACTTGGCAGCATGAATCTTGATGAGTTGCTCAAGAATCTGTGGAGTGCTGAAGCTGGTGATTTTGGTGGTGATGAGAATAACATGCAGCAGTTTGTTGAGCTTGTTTCTGGGTCCTCTTTGAACCCACAGGGTAGCCTAACATTGTTTGGAGATCTTTGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATGCAGACGAAAAAAGGCGGTGATAGAGATAAGGAAGCTAAGGAAAGACAGGCTACACTTGGCGAGATGACCTTGGAGGACTTCTTAGTGAAAGCCGGAGTGGTTACTGATTCTTTCCATACTAAGGATGATGGTGGTGCTATTTCGGGGATTGATTCGAACGTGGCTTCCGGAAAAAATGTTTCGCAGCATGATCATTGGATACAGTACCAACAGCAACAACATCAAAATCAGCAAGATGGTATGATGGTTGGTTTTGTGGCTGGCAATGTGATTCAACAGCCTTTCCAGGTTGCGGCGAATCCAATTTTGGATGCAGCATACTCTGAAACAATGATGAAAATGTCACCATCTTCTTTAATAGGTACACAAACTCTGGGTCGGAAAAGGGTTGCTTCTGATAATGTAGTGGTAGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCAAGAGCAAGAAAACAGGCTTACACACAAGAACTAGAGATTAAAGTTTCACGTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACAGTGTGAGATAGAGATGATACTGCCGTGTGCACCACCACCGGACCCTAAGCATCAGCTTCGCAGAACTGGTTCAGCGACTTTTTGA 966 0.4451 MGSQDESIQEPKGAPLVQPLVREGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKNLWSAEAGDFGGDENNMQQFVELVSGSSLNPQGSLTLFGDLCKKTVDEVWRDMQTKKGGDRDKEAKERQATLGEMTLEDFLVKAGVVTDSFHTKDDGGAISGIDSNVASGKNVSQHDHWIQYQQQQHQNQQDGMMVGFVAGNVIQQPFQVAANPILDAAYSETMMKMSPSSLIGTQTLGRKRVASDNVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQCEIEMILPCAPPPDPKHQLRRTGSATF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1004 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Lan8g1004 321 CDD bZIP_plant_BZIP46 251 296 - -
Lan8g1004 321 SMART brlzneu 247 303 IPR004827 GO:0003700|GO:0006355
Lan8g1004 321 PANTHER BZIP TRANSCRIPTION FACTOR 2 319 - -
Lan8g1004 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Lan8g1004 321 Pfam bZIP transcription factor 251 294 IPR004827 GO:0003700|GO:0006355
Lan8g1004 321 SUPERFAMILY Leucine zipper domain 251 297 IPR046347 GO:0003700|GO:0006355
Lan8g1004 321 Gene3D - 249 299 - -
Lan8g1004 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 319 IPR043452 GO:0003700|GO:0045893
Lan8g1004 321 Coils Coil 267 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1004 Lan-Chr8 11834726 11837720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1004 18 321 bZIP Transcription Factor Family AT3G56850 54.839 1.02e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g1004 bZIP_1 7.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1004 K14432 - gmx:100170741 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1004 8 11834726 11837720 Lan20g1431 20 20979563 20983266 LSH