Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1002 ATGACCAGGCAAATACTAAAGCTTTTACTTCTGTGTTGTTTTGCTCTCAAACTTTTACCCAATTTCCTTAAATCAATGGAATCTTTCCAAAGCTTTTACTTTGACACCGAAATATCAGCAGAGATCTTCATTGACCAGATCATGAAACTTCATGCAAGCATTTCTAAGCTAGAATCTCTTAGGATTTCTGAGGAAGTTAAAAGCCTTTTAGGTAACCTAGCAAAACTGTGCACACTCCTCCCTTCAACCATTGACATTAAAGCCTTTCCCCAAGAAGTGCTCAGCATTCGTGAGAGCCTCAATAACTTTGTTAGCCAAGCTGAAGGACTTTTAGAGCTTGAATTCTCAACTCTCATTAGCCACAAACCCAACCCCTTGAAATATCTTACTGAATACTCTTACTATGCTCACTATGTTAGAATAACAAGCATAGAGAGCAAAATCCTCAAAGAAAATGGCATTGGAAATGCAAAGAAAGTAGCCTTTGTGGGGTCAGGTGCAATGCCACTCTCTTCTATTCTAATGGCTACAAATCACATGGAATCCACACACTTTGATAACTTTGATATTGATGAAAATGCAAATGAGGTGGCTCGCAGAATTGTTGCTTCAGATGCTGCACTTGAGAAACGGATGAAGTTTGAGACACAAGACATTATGGAAGTAAAAGAGAAGTTAGGGCAATATGATTGCATCATTTTGGCAGCACTTGTGGGTATGAACAGAGAAGATAAAGTGAAGATTTTGGGACATATAAGAATGTATATGAAGGAGGGAGGTATTTTGATTGTGAGAAGTGCCAAAGGAGCTAGAACTTTCATATACCCTTATGTTGAGGATCATGACTTTGTTAATTTTCAACTGCTTACAACCTTTCAACCCAGACATGCTTTGGTGCATTCAGTTCTTCGCAAGAAGCCTAAAGCACAGCATCAGAAATCACACATGTAG 951 0.387 MTRQILKLLLLCCFALKLLPNFLKSMESFQSFYFDTEISAEIFIDQIMKLHASISKLESLRISEEVKSLLGNLAKLCTLLPSTIDIKAFPQEVLSIRESLNNFVSQAEGLLELEFSTLISHKPNPLKYLTEYSYYAHYVRITSIESKILKENGIGNAKKVAFVGSGAMPLSSILMATNHMESTHFDNFDIDENANEVARRIVASDAALEKRMKFETQDIMEVKEKLGQYDCIILAALVGMNREDKVKILGHIRMYMKEGGILIVRSAKGARTFIYPYVEDHDFVNFQLLTTFQPRHALVHSVLRKKPKAQHQKSHM* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1002 316 Pfam Nicotianamine synthase protein 40 306 IPR004298 GO:0030410|GO:0030418
Lan8g1002 316 Gene3D Vaccinia Virus protein VP39 38 307 IPR029063 -
Lan8g1002 316 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 35 312 IPR004298 GO:0030410|GO:0030418
Lan8g1002 316 CDD AdoMet_MTases 188 264 - -
Lan8g1002 316 PANTHER NICOTIANAMINE SYNTHASE 3 26 309 IPR004298 GO:0030410|GO:0030418
Lan8g1002 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 281 IPR029063 -
Lan8g1002 316 PANTHER NICOTIANAMINE SYNTHASE 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1002 Lan-Chr8 11808611 11809647 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1002 41 303 Nicotianamine Synthase Gene Family AT5G04950 40.977 2.13e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1002 K05953 - gmx:100819726 369.777