Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1000 ATGGATTCTATCCAAAGCTTAGACTTTTTCACCGAAATTTCACCTGAGATCTTCATAGACCAGATCATGAAACTTCATGCAAGAATTTCTAAGCTAGAATCTCCTAGGAATTCTGAGGAAGTTAACAACCTTTTGGGTAACCTAGCAAAATTGTGCTCCCTCCTTCCTTCAACCACTGACATTAAAGACTTTCCCAAAGAGGTGCTGAACATTCGTGAGAGCCTCAATAACTTTACTAGCCAAGCTGAAGGGCTTTTAGAGCTTGAATCCTCAACTCTCATTAGCCTCAAACCCAAACCCTTGGACAGTGTTACAGAATATCCTTACTATGGAAACTATGTTAGAATAGCACGCATGGAGAGCAAAATCCTGAAAGCACATGGCATGGAAAATGCAAAGAAGGTAGCTTTTGTGGGATCAGGTGCCATGCCACTCTCTTCCATTCTAATGGCTTTAAATCACATGGAATCCACACACTTTGATAACTTTGATATTGATGATAAGGCAAATGAAGTGGCTCGTAGAATTGTTGCTTCAGATGCTGAACTTGAGAAACGGATGAAGTTTGAGACACAAGATATTATGGAAGTAAAAGAGAGGTTAGGGCAATATGATTGCATCATTTTGGCAGCACTTGTGGGTGTGAACAGAACAGCAAAAGTGAAGATTCTAGGACACTTAAGAGTGTATATGAAGGAGGGGGGTTTTTTGGTTGTGAGAAGTGCAAAAGGAGCTAGAACTTTTATCTACCCTTCGGTTGATGTTGGTGACTTGGTTAATTTTGAACTACTTACAACCTTTCAACCCACACATGCTTTGGTCCACTCAGTTCTTCTTCGCAAGAAGACTAAAGCATAG 858 0.4044 MDSIQSLDFFTEISPEIFIDQIMKLHARISKLESPRNSEEVNNLLGNLAKLCSLLPSTTDIKDFPKEVLNIRESLNNFTSQAEGLLELESSTLISLKPKPLDSVTEYPYYGNYVRIARMESKILKAHGMENAKKVAFVGSGAMPLSSILMALNHMESTHFDNFDIDDKANEVARRIVASDAELEKRMKFETQDIMEVKERLGQYDCIILAALVGVNRTAKVKILGHLRVYMKEGGFLVVRSAKGARTFIYPSVDVGDLVNFELLTTFQPTHALVHSVLLRKKTKA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1000 285 CDD AdoMet_MTases 137 239 - -
Lan8g1000 285 Gene3D Vaccinia Virus protein VP39 13 284 IPR029063 -
Lan8g1000 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 242 IPR029063 -
Lan8g1000 285 PANTHER NICOTIANAMINE SYNTHASE 3 284 - -
Lan8g1000 285 PANTHER NICOTIANAMINE SYNTHASE 3 3 284 IPR004298 GO:0030410|GO:0030418
Lan8g1000 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 285 IPR004298 GO:0030410|GO:0030418
Lan8g1000 285 Pfam Nicotianamine synthase protein 16 284 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1000 Lan-Chr8 11784428 11785487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1000 17 282 Nicotianamine Synthase Gene Family AT5G04950 42.435 1.38e-69 216