Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0991 ATGGAGGCAGCATCAGGTCCTCACTTCTCAGGTCTACACCTAGACGCCGTCGTTTCACCTTCTTGTTCTTCTTCTTCTCCTTTCGATTCATCAACCTTAAATCCCAATCAACCCTTCGTTATAGGAGTTTCTGGAGGCACTGCTTCTGGTAAGACCACTGTTTGTGATATGATTATCCAGCAACTTCACGATCACCGTGTCGTTCTTGTCAATCAGGATTCGTTTTATCGTGGTTTGACACCTGAGGAGTTGGAGCGTGTGCACGAGTACAATTTTGATCATCCTGATGCTTTTGATACTGAGCAGCTATTAGAGTGCATGAGAAAGCTCATAGGTGGCCAGAGTGTTCAACTCCCAATCTACGACTTCAAGAAGCACCAACGCTCGACAGATAGCTTCCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTTTTCCATGAGCAAGGTGTCCGGGATCTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGATACTGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAATTTGTTAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAGTATGCTGATGTGATCATTCCCAGAGGTGGTGATAATCATGTTGCCGTTGATCTGATCGTGCAACATATTCACACAAAACTTGGTCAACATGATCTATGCAAGATATATCCTAATGTGTATGTTATTCAGTCAACATTTCAGATAAGGGGCATGCACACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTCATACGTCTGGTTGTTGAGCATGGCCTTGGTCATCTTCCATTCGTTGAGAAGCAAGTAGTTACTCCAACAGGATCTGTCTACACTGGTGTTGACTTCTGCAAGAAATTGTGTGGCGTTTCAATTATTCGAAGTGGTGAGAGTATGGAAAATGCACTTCGAGCATGTTGTAAAAGCATTAAAATTGGAAAAATTCTGATCCATCGGGATGGAGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGACATGTCTTGCTTCTTGACCCTGTCTTGGCTACAGGTAACTCTGCGAACCAAGCAATTGCGTTACTCATTCAGAAAGGAGTTCCAGAATCCCACATTATATTCCTCAATCTCATATCTGCTCCCGAGGGAATCCAGTGCGTGTGTAAAAAGTTTCCCTCATTGAAAATTGTCACATCTGAGATTGATCATGCATTAAACGAAGAGTTTCGTGTTATCCCAGGATTGGGTGAGTTTGGCGATCGCTACTTTGGTACCGATCTTGTCTTGTGA 1386 0.4242 MEAASGPHFSGLHLDAVVSPSCSSSSPFDSSTLNPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELERVHEYNFDHPDAFDTEQLLECMRKLIGGQSVQLPIYDFKKHQRSTDSFRQVNASDVIILEGILVFHEQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDQDISKHDFVFYSDRLIRLVVEHGLGHLPFVEKQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKSIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIALLIQKGVPESHIIFLNLISAPEGIQCVCKKFPSLKIVTSEIDHALNEEFRVIPGLGEFGDRYFGTDLVL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0991 461 Gene3D - 34 241 IPR027417 -
Lan8g0991 461 Pfam Uracil phosphoribosyltransferase 256 457 - -
Lan8g0991 461 PRINTS Uridine kinase signature 38 55 - -
Lan8g0991 461 PRINTS Uridine kinase signature 68 79 - -
Lan8g0991 461 PRINTS Uridine kinase signature 113 128 - -
Lan8g0991 461 PRINTS Uridine kinase signature 170 180 - -
Lan8g0991 461 PRINTS Uridine kinase signature 184 195 - -
Lan8g0991 461 PRINTS Uridine kinase signature 206 219 - -
Lan8g0991 461 PANTHER URIDINE KINASE 18 456 - -
Lan8g0991 461 TIGRFAM udk: uridine kinase 38 238 IPR000764 -
Lan8g0991 461 CDD UMPK 40 238 IPR000764 -
Lan8g0991 461 ProSiteProfiles UvrC family, homology region profile. 144 227 IPR001162 GO:0009381
Lan8g0991 461 CDD PRTases_typeI 315 430 IPR000836 -
Lan8g0991 461 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Lan8g0991 461 Gene3D - 242 457 IPR029057 -
Lan8g0991 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 231 IPR027417 -
Lan8g0991 461 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Lan8g0991 461 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 18 456 IPR029930 GO:0004849|GO:0044206
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0991 Lan-Chr8 11677690 11683702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0991 1 458 PRT Gene Family AT5G40870 85.563 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0991 K00876 - gmx:100780005 842.417