Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0983 ATGAGTGAAAGATTTGGACGAAAGATTCGTGTTTTCGAAACATTAACAGTTTCTCCCTCACCAACTGCTGCAGCAAACAATGGAGAGGAGACTGATGATTTCTATGAGTTTACTGCTGAAGATTATTACCGACTTTTAGCTACTAAAAAGGAAGATAAGTTATTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGCTGTGATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGTTACCTTTCACCCATCTGAAACAATCCAGAGTTTAATTGATTTCCTCACAGAAGTTATTACAAAACCAGAGCAGCCATTTTACATATATACTACTCCACCTAAGAAGCTGATCAAAGACATGTCTCAGGATTTGTATACTGCTGGATTTTGTCCCGGTGCAATTGTGTACTTCTCATACAATGTTCCAAAAGGTGATGGCACTTTGGTTGGGCACAATGGCCCTTACTTATGTGAAGAGGTCATGTCCTTGAAGGGTTTGAATATAGGTAATGATCAAGGTCAGCCATCGTCAGAGCCGGTTCAGTCTGCACCCGAGCCTGTTGAGGCAGCACAACAAAATCCTGCTGTTGAAGAGCGTAAACCGGCTGACAAAAAGCTTGTTAAACCAAGGTGGCTAAAGATGTGA 672 0.4182 MSERFGRKIRVFETLTVSPSPTAAANNGEETDDFYEFTAEDYYRLLATKKEDKLLKTRKIREAEEAARRSRITKAVIRVRFPDNHTLEVTFHPSETIQSLIDFLTEVITKPEQPFYIYTTPPKKLIKDMSQDLYTAGFCPGAIVYFSYNVPKGDGTLVGHNGPYLCEEVMSLKGLNIGNDQGQPSSEPVQSAPEPVEAAQQNPAVEERKPADKKLVKPRWLKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0983 223 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 4 223 - -
Lan8g0983 223 Gene3D - 64 147 - -
Lan8g0983 223 MobiDBLite consensus disorder prediction 176 223 - -
Lan8g0983 223 ProSiteProfiles UBX domain profile. 70 146 IPR001012 GO:0005515
Lan8g0983 223 CDD UBX2_UBXN9 75 148 - -
Lan8g0983 223 MobiDBLite consensus disorder prediction 176 190 - -
Lan8g0983 223 Pfam UBX domain 73 142 IPR001012 GO:0005515
Lan8g0983 223 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 4 223 IPR044232 GO:0032984|GO:0051117
Lan8g0983 223 SUPERFAMILY Ubiquitin-like 49 146 IPR029071 -
Lan8g0983 223 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0983 Lan-Chr8 11593760 11598200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0983 3 95 C2H2 Transcription Factor Family AT2G01650 30.928 1.99e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0983 K15627 - gmx:100818386 333.569