Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0955 ATGTACCCTTCTACTTACACTTCCTCAGGCCCTTACACTTGTTACCCTTCTTCTAATTCAAACCCTTTTTTTCCTTTCCTTAATCCTGAAAATGCTTCTTCAAGCAACAACAACACCCTTCTTCATGATCCACTTGTTCATGTTCCTTACAAAATACCAACTCATTATTATGTTCATAACAAACCAATAATCCAAGAAACACTGACCAATTTGGCTGTTTCTGATGCTCATGCTGCTACAATGCCCAAACAAGACCAGATTATAAGCGGTGGTGGTAGTGGTGCTTATAATCACTATGAATTTTCTTCATTGCTCACAAAGAAACCAGCCAAGAAAGATAGGCATAGCAAGATTTACACTTCTCAGGGCTTAAGGGACAGAAGGGTGAGGTTGTCAATCGGGATCTCGCGAAAGTTCTTCGATCTACAAGACATGCTAGGGTTTGACAAAGCAAGCAACACCCTTGAGTGGCTCTTTAACAAGTCCAAGAAAGCAATTAAGGAACTTGCTAGAAGCAAGAACAGTAATATCATTGAAGGTGATGCAAAGAGCTTCTCATATTCTTCTGATTGTGAGGACTGTAATGAAGTTGTTTCAGGGATCAAGAATGAACAAGGTATCATCAATGCTGATCATGATAATCTAAACCTACAACAACAAGGGTTAGATTCAAATGCTGTGAAAGAGATGAGAAAGTTGAAAAGCGCACAGAAGGAGCCTTCTTGTGTTCACACAAAGATGAATGAGTCAAGGGAGAAAGCAAGAGAAAGAGCAAGGGAAAGGACTAGTAACAAGATGAGTAACACTACCAGCAATAATGGGAGGGTAATGCAAGTGCAAGACATGAAGAAAAAGTGTATTGCAACAACTGAAAATAATACTGAAACCTTGCAACAATTGAGATCAACTATTCAGCTTGAGGACTGTGCAAGATCACCTAATAAGATGATTCAAACAAAACCTCATCATCACCTTGCTCTTAGTAATGAAGCACCTAGAGATGGCAACTTCAATGTGATTGAGGAATCCATTGTGATTAGGAGAAAGTTGAAGCCTTCAATAGTGTCTTCTTCTCATCATCATCACCAAAACCTTATGATCCCAAAGGAAGCAAGTTTGAACAACACTGACTACAACTCCTTCACCAACTTATCTCCAAATTGGGATAATTCTACTAATGGTGGCAGTGGTATTAATGGCAGACCCACATTTTGTACAATAGCCAGCATGAATCTCTCTACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGTAG 1275 0.3945 MYPSTYTSSGPYTCYPSSNSNPFFPFLNPENASSSNNNTLLHDPLVHVPYKIPTHYYVHNKPIIQETLTNLAVSDAHAATMPKQDQIISGGGSGAYNHYEFSSLLTKKPAKKDRHSKIYTSQGLRDRRVRLSIGISRKFFDLQDMLGFDKASNTLEWLFNKSKKAIKELARSKNSNIIEGDAKSFSYSSDCEDCNEVVSGIKNEQGIINADHDNLNLQQQGLDSNAVKEMRKLKSAQKEPSCVHTKMNESREKARERARERTSNKMSNTTSNNGRVMQVQDMKKKCIATTENNTETLQQLRSTIQLEDCARSPNKMIQTKPHHHLALSNEAPRDGNFNVIEESIVIRRKLKPSIVSSSHHHHQNLMIPKEASLNNTDYNSFTNLSPNWDNSTNGGSGINGRPTFCTIASMNLSTGLQIFGKSWE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0955 424 ProSiteProfiles R domain profile. 248 265 IPR017888 -
Lan8g0955 424 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 424 IPR005333 GO:0003700
Lan8g0955 424 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 19 424 - -
Lan8g0955 424 MobiDBLite consensus disorder prediction 233 272 - -
Lan8g0955 424 Pfam TCP family transcription factor 110 268 IPR017887 -
Lan8g0955 424 MobiDBLite consensus disorder prediction 233 263 - -
Lan8g0955 424 ProSiteProfiles TCP domain profile. 111 169 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0955 Lan-Chr8 11280923 11282347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0955 107 176 TCP Transcription Factor Family AT1G67260 75.714 1.05e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan8g0955 TCP 1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0955 - - lang:109354107 849.351