Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0942 ATGCAAGAGGTTACAGGACTCAATTATTTACTCCCTTCTCCATACCCTACAAACTACAACACAATTCAGAACAACAAATTTCAATCTCAAACATTCCCTAACCAATTATATGGCTTCCACAACAACCCTTTTCAAATACATGAAAACTTTAGTCCTCAATCATCAGGTATCAGCAGCAACTCAACCTCTGATGAAGCAGATGATCAAAACCTGAGTCTCATCAATGAGAGGAAACACAGAAGGATGATATCGAATCGCGAATCCGCGAGGCGATCGCGAATGAGGAAGCAGAAACAACTTGATGAGCTATGGTCACAGGTCATGTGGCTTAGGAATGAGAATCATAAACTATTAGATAAGCTGAACCATGTATCAGAGTGTCATGATCAAACACTTCAAGAAAATGCTAAGCTCAAAGAACAAACTTCAGAACTTCAACAAATCATAAGGGACATGCAGATACATAGTCCTTGTCCTTGTCCTTCTTTTGGACCCTTAGAACATGTTCCTTGTGACTCATCATATCTTAGAATATCTCATTCCTCAAACCAATCCATCTCATCAAATTCTATGGACTTTCTTGGTTAA 588 0.3878 MQEVTGLNYLLPSPYPTNYNTIQNNKFQSQTFPNQLYGFHNNPFQIHENFSPQSSGISSNSTSDEADDQNLSLINERKHRRMISNRESARRSRMRKQKQLDELWSQVMWLRNENHKLLDKLNHVSECHDQTLQENAKLKEQTSELQQIIRDMQIHSPCPCPSFGPLEHVPCDSSYLRISHSSNQSISSNSMDFLG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0942 195 Pfam bZIP transcription factor 77 135 IPR004827 GO:0003700|GO:0006355
Lan8g0942 195 PANTHER BZIP TRANSCRIPTION FACTOR 2 183 - -
Lan8g0942 195 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Lan8g0942 195 Coils Coil 128 148 - -
Lan8g0942 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lan8g0942 195 Gene3D - 75 131 - -
Lan8g0942 195 SUPERFAMILY Leucine zipper domain 77 126 IPR046347 GO:0003700|GO:0006355
Lan8g0942 195 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
Lan8g0942 195 MobiDBLite consensus disorder prediction 48 67 - -
Lan8g0942 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 126 IPR004827 GO:0003700|GO:0006355
Lan8g0942 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 2 183 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0942 Lan-Chr8 11151697 11152509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0942 10 160 bZIP Transcription Factor Family AT3G30530 61.039 9.98e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan8g0942 bZIP_1 1.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0942 - - lang:109335342 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0153 5 1901897 1902612 Lan8g0942 8 11151697 11152509 LSH
Lan8g0942 8 11151697 11152509 Lan20g1464 20 21352918 21356203 LSH
Lan8g0942 8 11151697 11152509 Lan8g0145 8 2432312 2433360 PCT
Lan8g0145 8 2432312 2433360 Lan8g0942 8 11151697 11152509 PCT