Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0939 ATGACAAATGGAAATCTAGCACCAATGGCAGAGAAGAAAATTTCAAGAAAGAACAAAGCAATTATTAATGACAATGAACCTTTGATACCAAAGACTCATCAAGAAAAAACTGATGCTGGTTTTGATGATTTTAATGGAGCTTCATTTTCTGGAGCTGTTTTTAACTTGTCCACAACAATAATTGGTGCTGGAATCATGTCCTTGCCTGCAACATTGAAAGAGTTGGGTATGGTGCCTGGTCTTGTTGCTATCACATTGATGGCTTTCTTGACTGAGAAGTCAATTGAGTTTATGATCAGGTTTTCAAGGGCAGAGAACCTTACTTCTTATGGAGGCCTTATGGGTGATGCTTTTGGGAAATATGGAAAAGCTCTTTTGCAGATATGTGTTATAATCAACAACATTGGTGTTCTCATTGTTTACATGATTATTATTGGTGATGTTCTCTCTGGAACTTCTTCTGGTGGAGATCATCATTCTGGTATCCTTGAAGAATGGTTTGGAATCCATTGGTGGACTAGCCGTACTTTTGTTCTCCTTTTAACAACACTACTTGTGTTTGCACCTTTGGTCACCTTTAAGCGAATTGATTCATTGAGATTCACTTCTGCAATATCAGTTGTATTAGCAGTTGTTTTTCTTGTCATTGCTGTTGGAATTGCAGTTGTCAAGATTATCAGTGGAGGCATTGGAATGCCAAGACTCTTCCCAGTCATTACAGATATAGAGTCATTCTTCAAATTGTTCACTGTAGTTCCTGTGCTTGTCACTGCATATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTCGAGGACTCGTCACAGATGCACGGGGTTGTACGTACTGCACTTACTCTATGCTCTTCAGTCTATTTAATGACAAGCTTCGTTGGGTACCTCCTATTTGGCGAAGGGACTCTCGATGATGTGCTCGCCAATTTTGATACCGATCTTGGGATTCCTTTCAGTTCTGTACTCAATGACATTGTTCGTTTAAGCTACGCTGCACATCTCATGCTTGTATTTCCTGTTGTCTTCTATCCACTGCGTATCAACATAGATGGTCTCCTATTTCCTAAATCAAAGCTATTGGTTCTAGATAATCTGAGATTTGCATCGATTACTATTTCCCTTATCGGCATTATCTTCCTGGGAGCAAGTTTCATACCGAGCATTTGGGACGCTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCTGCTGCTATCACACTTAGGGATCAGAATAACCTAGCAACTAAACAAGACAAGGTTATTTCTGTGATCATGATAATCTTGGCAGTCTTCTCAAATGCAGTGGCTATATACAGTGATGCATTTGCCTAG 1368 0.3969 MTNGNLAPMAEKKISRKNKAIINDNEPLIPKTHQEKTDAGFDDFNGASFSGAVFNLSTTIIGAGIMSLPATLKELGMVPGLVAITLMAFLTEKSIEFMIRFSRAENLTSYGGLMGDAFGKYGKALLQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHSGILEEWFGIHWWTSRTFVLLLTTLLVFAPLVTFKRIDSLRFTSAISVVLAVVFLVIAVGIAVVKIISGGIGMPRLFPVITDIESFFKLFTVVPVLVTAYICHYNVHSIDNELEDSSQMHGVVRTALTLCSSVYLMTSFVGYLLFGEGTLDDVLANFDTDLGIPFSSVLNDIVRLSYAAHLMLVFPVVFYPLRINIDGLLFPKSKLLVLDNLRFASITISLIGIIFLGASFIPSIWDAFQFTGATAAVCVGFIFPAAITLRDQNNLATKQDKVISVIMIILAVFSNAVAIYSDAFA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0939 455 PANTHER AMINO ACID TRANSPORTER 9 455 - -
Lan8g0939 455 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 9 455 - -
Lan8g0939 455 Pfam Transmembrane amino acid transporter protein 47 451 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0939 Lan-Chr8 11122765 11126721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0939 21 455 Amino Acid or Auxin Permease AAAP Family AT5G38820 69.565 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0939 K14207 - gmx:100796345 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0939 8 11122765 11126721 Lan9g0105 9 1270576 1273766 PCT
Lan8g0939 8 11122765 11126721 Lan2g0099 2 868474 872097 PCT
Lan8g0939 8 11122765 11126721 Lan8g0146 8 2480825 2484854 PCT
Lan9g0105 9 1270576 1273766 Lan8g0939 8 11122765 11126721 PCT
Lan2g0099 2 868474 872097 Lan8g0939 8 11122765 11126721 PCT
Lan8g0146 8 2480825 2484854 Lan8g0939 8 11122765 11126721 PCT